CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G266000
(
Gossypium raimondii
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
Gorai.004G266000
T350632_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G266000.1
Whirly
74
211
IYKGKASLSISPVLPTFVKIDSDIGGLKVNRRGSMMLTFCPAIGERKYDWEQRQKFALSPTEVGSLISMGAHDASEFYHDPSMKSSNAGQVSKKLCIKAFDSGNGYMISLTVTNNILKSNEQFNIPVTTAEFAVLKTA
Gorai.004G266000.2
Whirly
74
211
IYKGKASLSISPVLPTFVKIDSDIGGLKVNRRGSMMLTFCPAIGERKYDWEQRQKFALSPTEVGSLISMGAHDASEFYHDPSMKSSNAGQVSKKLCIKAFDSGNGYMISLTVTNNILKSNEQFNIPVTTAEFAVLKTA
Gorai.004G266000.3
Whirly
74
211
IYKGKASLSISPVLPTFVKIDSDIGGLKVNRRGSMMLTFCPAIGERKYDWEQRQKFALSPTEVGSLISMGAHDASEFYHDPSMKSSNAGQVSKKLCIKAFDSGNGYMISLTVTNNILKSNEQFNIPVTTAEFAVLKTA
Links
Other
Whirly
family TFs
Other
Gossypium raimondii
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_035992
Theobroma cacao
TCM_035992
N
0.816
ATWHY2
Arabidopsis lyrata
scaffold_202038.1
N
0.713
SapurV1A.0002s0060
Salix purpurea
SapurV1A.0002s0060
N
0.713
WHY2
Arabidopsis thaliana
AT1G71260
N
0.706
mgf015710m
Mimulus guttatus
mgf015710m
N
0.706
Carubv10020880m.g
Capsella rubella
Carubv10020880m.g
N
0.706
Eucgr.K01091
Eucalyptus grandis
Eucgr.K01091
N
0.706