cassava41173.m1 (Manihot esculenta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 cassava41173.m1 T351459_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.767 0.767
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.767 0.767
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41173.m1 WRC 117 159

Links

Other WRC family TFs
Other Manihot esculenta TFs

567 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BN946_scf184576.g4 Trametes cinnabarina BN946_scf184576.g4 I 0.000
CC1G_00679 Coprinopsis cinerea CC1G_00679 I 0.000
CERSUDRAFT_79927 Ceriporiopsis subvermispora CERSUDRAFT_79927 I 0.000
fgenesh1_pg.C_scaffold_18000061 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_18000061 I 0.000
fgenesh2_pg.C_scaffold_1000086 Heterobasidion annosum fgenesh2_pg.C_scaffold_1000086 I 0.000
FOMPIDRAFT_1133812 Fomitopsis pinicola FOMPIDRAFT_1133812 I 0.000
GALMADRAFT_225495 Galerina marginata GALMADRAFT_225495 I 0.000
GLOTRDRAFT_134921 Gloeophyllum trabeum GLOTRDRAFT_134921 N 0.000
GLOTRDRAFT_30797 Gloeophyllum trabeum GLOTRDRAFT_30797 I 0.000
JAAARDRAFT_75549 Jaapia argillacea JAAARDRAFT_75549 N 0.000
K443DRAFT_678969 Laccaria amethystina K443DRAFT_678969 I 0.000
M378DRAFT_6115 Amanita muscaria M378DRAFT_6115 I 0.000
M413DRAFT_20449 Hebeloma cylindrosporum M413DRAFT_20449 I 0.000
Moror_4577 Moniliophthora roreri Moror_4577 I 0.000
PAXINDRAFT_86770 Paxillus involutus PAXINDRAFT_86770 I 0.000
PAXRUDRAFT_128990 Paxillus rubicundulus PAXRUDRAFT_128990 I 0.000
PHACADRAFT_169221 Phanerochaete carnosa PHACADRAFT_169221 I 0.000
PHLGIDRAFT_79048 Phlebiopsis gigantea PHLGIDRAFT_79048 I 0.000
PILCRDRAFT_820718 Piloderma croceum PILCRDRAFT_820718 I 0.000
POSPLDRAFT_106184 Postia placenta POSPLDRAFT_106184 I 0.000
SCHCODRAFT_114530 Schizophyllum commune SCHCODRAFT_114530 N 0.000
SCHCODRAFT_258883 Schizophyllum commune SCHCODRAFT_258883 D 0.000
SCLCIDRAFT_101722 Scleroderma citrinum SCLCIDRAFT_101722 N 0.000
SERLA73DRAFT_115823 Serpula lacrymans SERLA73DRAFT_115823 I 0.000
SERLA73DRAFT_63698 Serpula lacrymans SERLA73DRAFT_63698 I 0.000