CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PHLGIDRAFT_79048
(
Phlebiopsis gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PHLGIDRAFT_79048
T126050_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.777
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIP02488
C2H2 ZF
4
29
YKCKVPGCSKYFQRGEHLKRHVRSIH
KIP02488
C2H2 ZF
35
59
HKCPYRACGKDFSRHDNLRQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Phlebiopsis gigantea
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHACADRAFT_169221
Phanerochaete carnosa
PHACADRAFT_169221
I
0.821
fgenesh1_pg.C_scaffold_18000061
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_18000061
I
0.821
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I
0.777
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
0.777
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.777
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
0.772
GLOTRDRAFT_30797
Gloeophyllum trabeum
GLOTRDRAFT_30797
I
0.772
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
0.772
SERLA73DRAFT_63698
Serpula lacrymans
SERLA73DRAFT_63698
I
0.772
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
0.772
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
0.771
CC1G_00679
Coprinopsis cinerea
CC1G_00679
I
0.762
K443DRAFT_678969
Laccaria amethystina
K443DRAFT_678969
I
0.762
LACBIDRAFT_291829
Laccaria bicolor
LACBIDRAFT_291829
I
0.762
PAXINDRAFT_86770
Paxillus involutus
PAXINDRAFT_86770
I
0.762
PAXRUDRAFT_128990
Paxillus rubicundulus
PAXRUDRAFT_128990
I
0.762
GALMADRAFT_225495
Galerina marginata
GALMADRAFT_225495
I
0.757
M378DRAFT_6115
Amanita muscaria
M378DRAFT_6115
I
0.757
M413DRAFT_20449
Hebeloma cylindrosporum
M413DRAFT_20449
I
0.757
Moror_4577
Moniliophthora roreri
Moror_4577
I
0.757
PILCRDRAFT_820718
Piloderma croceum
PILCRDRAFT_820718
I
0.756