CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHACADRAFT_169221
(
Phanerochaete carnosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PHACADRAFT_169221
T125954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.777
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKM61782
C2H2 ZF
409
434
YKCKVPGCNKCFQRGEHLKRHVRSIH
EKM61782
C2H2 ZF
440
464
HKCPYKKCGKDFSRHDNLRQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Phanerochaete carnosa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_18000061
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_18000061
I
0.827
PHLGIDRAFT_79048
Phlebiopsis gigantea
PHLGIDRAFT_79048
I
0.821
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I
0.777
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
0.777
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.777
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
0.772
GLOTRDRAFT_30797
Gloeophyllum trabeum
GLOTRDRAFT_30797
I
0.772
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
0.772
SERLA73DRAFT_63698
Serpula lacrymans
SERLA73DRAFT_63698
I
0.772
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
0.772
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
0.771
CC1G_00679
Coprinopsis cinerea
CC1G_00679
I
0.762
K443DRAFT_678969
Laccaria amethystina
K443DRAFT_678969
I
0.762
LACBIDRAFT_291829
Laccaria bicolor
LACBIDRAFT_291829
I
0.762
PAXINDRAFT_86770
Paxillus involutus
PAXINDRAFT_86770
I
0.762
PAXRUDRAFT_128990
Paxillus rubicundulus
PAXRUDRAFT_128990
I
0.762
GALMADRAFT_225495
Galerina marginata
GALMADRAFT_225495
I
0.757
M378DRAFT_6115
Amanita muscaria
M378DRAFT_6115
I
0.757
M413DRAFT_20449
Hebeloma cylindrosporum
M413DRAFT_20449
I
0.757
Moror_4577
Moniliophthora roreri
Moror_4577
I
0.757
PILCRDRAFT_820718
Piloderma croceum
PILCRDRAFT_820718
I
0.756