CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_27484
(
Aegilops tauschii
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
F775_27484
T352528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.833
0.695
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.833
0.695
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.833
0.695
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN
NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.826
0.661
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.822
0.661
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.809
0.559
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.809
0.559
WRKY11
M11464_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.809
0.559
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT22592
WRKY
125
185
DDGRSWRKYGQKDILGAQHPRAYYRCTYQKTQGCAATKQVQRADEDPALFDVIYHGEHTCV
Links
Other
WRKY
family TFs
Other
Aegilops tauschii
TFs
543 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT5G55690
Arabidopsis thaliana
AT5G55690
N
0.000
AGL82
Arabidopsis thaliana
AT5G58890
N
0.000
Bo3g021400
Brassica oleracea
Bo3g021400
N
0.000
Bostr.26833s0357
Boechera stricta
Bostr.26833s0357
N
0.000
Bostr.26833s0688
Boechera stricta
Bostr.26833s0688
N
0.000
Bra002611
Brassica rapa
Bra002611
N
0.000
Cagra.0891s0086
Capsella grandiflora
Cagra.0891s0086
N
0.000
Cagra.6942s0024
Capsella grandiflora
Cagra.6942s0024
N
0.000
Carubv10027564m.g
Capsella rubella
Carubv10027564m.g
N
0.000
Carubv10027979m.g
Capsella rubella
Carubv10027979m.g
N
0.000
fgenesh1_pg.C_scaffold_8001596
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8001596
N
0.000
AGL82
Arabidopsis lyrata
scaffold_802501.1
N
0.000
Thhalv10015500m.g
Eutrema salsugineum
Thhalv10015500m.g
N
0.000
Thhalv10015661m.g
Eutrema salsugineum
Thhalv10015661m.g
N
0.000