CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI09G06720
(
Oryza rufipogon
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
ORUFI09G06720
T354139_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN
NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.830
0.746
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.824
0.644
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.821
0.661
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.821
0.661
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.819
0.593
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.818
0.678
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.818
0.678
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.818
0.678
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI09G06720.1
WRKY
126
186
DDGHSWRKYGQKEILGAKHPRGYYRCTHRHSQGCMATKQVQRTDEDATVFDVIYHGEHTCV
Links
Other
WRKY
family TFs
Other
Oryza rufipogon
TFs
602 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R011824
Calypte anna
Aan_R011824
I
Afo_R002575
Aptenodytes forsteri
Afo_R002575
I
Alligator_sinensis_CCG009270.1
Alligator sinensis
Alligator_sinensis_CCG009270.1
I
Brh_R009664
Buceros rhinoceros
Brh_R009664
I
Cmyd_10006544
Chelonia mydas
Cmyd_10006544
I
NFKB2
Anolis carolinensis
ENSACAG00000014215
I
ENSAMEG00000017735
Ailuropoda melanoleuca
ENSAMEG00000017735
I
ENSAPLG00000013409
Anas platyrhynchos
ENSAPLG00000013409
I
NFKB2
Bos taurus
ENSBTAG00000006017
I
ENSBTAP00000007904-D1
Bos grunniens
ENSBTAP00000007904-D1
I
NFKB2
Canis familiaris
ENSCAFG00000010155
I
NFKB2
Callithrix jacchus
ENSCJAG00000017928
I
NFKB2
Cavia porcellus
ENSCPOG00000004847
I
ENSCSAG00000005442
Chlorocebus sabaeus
ENSCSAG00000005442
I
NFKB2
Dasypus novemcinctus
ENSDNOG00000032784
I
Nfkb2
Dipodomys ordii
ENSDORG00000013409
I
NFKB2
Equus caballus
ENSECAG00000019593
I
NFKB2
Echinops telfairi
ENSETEG00000002347
I
ENSFALG00000007271
Ficedula albicollis
ENSFALG00000007271
I
NFKB2
Homo sapiens
ENSG00000077150
D
NFKB2
Gallus gallus
ENSGALG00000005653
I
NFKB2
Gorilla gorilla
ENSGGOG00000006971
I
NFKB2
Loxodonta africana
ENSLAFG00000006805
I
ENSMEUG00000011176
Macropus eugenii
ENSMEUG00000011176
I
ENSMGAG00000007084
Meleagris gallopavo
ENSMGAG00000007084
I
NFKB2
Microcebus murinus
ENSMICG00000011856
I
NFKB2
Myotis lucifugus
ENSMLUG00000006287
I
NFKB2
Macaca mulatta
ENSMMUG00000002990
I
ENSMPUG00000016882
Mustela putorius furo
ENSMPUG00000016882
I
Nfkb2
Mus musculus
ENSMUSG00000025225
D
Nfkb1
Mus musculus
ENSMUSG00000028163
D
ENSNLEG00000015079
Nomascus leucogenys
ENSNLEG00000015079
I
ENSOANG00000006254
Ornithorhynchus anatinus
ENSOANG00000006254
I
ENSOANG00000028755
Ornithorhynchus anatinus
ENSOANG00000028755
I
ENSOANG00000030023
Ornithorhynchus anatinus
ENSOANG00000030023
I
ENSOARG00000000483
Ovis aries
ENSOARG00000000483
I
NFKB2
Oryctolagus cuniculus
ENSOCUG00000005735
I
NFKB2
Otolemur garnettii
ENSOGAG00000016379
I
NFKB2
Ochotona princeps
ENSOPRG00000006569
I
ENSP00000189444
Macaca fascicularis
ENSP00000189444
I
ENSPANG00000021013
Papio anubis
ENSPANG00000021013
I
NFKB2
Procavia capensis
ENSPCAG00000011503
I
ENSPPYG00000002599
Pongo abelii
ENSPPYG00000002599
I
NFKB2
Pan troglodytes
ENSPTRG00000002888
I
Nfkb2
Rattus norvegicus
ENSRNOG00000019311
I
NFKB2
Sorex araneus
ENSSARG00000006180
I
ENSSHAG00000018852
Sarcophilus harrisii
ENSSHAG00000018852
I
NFKB2
Sus scrofa
ENSSSCG00000010580
I
NFKB1
Sus scrofa
ENSSSCG00000030957
I
ENSSTOG00000002191
Ictidomys tridecemlineatus
ENSSTOG00000002191
I
NFKB2
Taeniopygia guttata
ENSTGUG00000007491
I
NFKB2
Tursiops truncatus
ENSTTRG00000008357
I
Gfo_R002459
Geospiza fortis
Gfo_R002459
I
Myotis_brandtii_NFKB2_10025917
Myotis brandtii
Myotis_brandtii_NFKB2_10025917
I
Ogr18048
Ophisaurus gracilis
Ogr18048
I
Pvit_13855
Pogona vitticeps
Pvit_13855
I
nfkb2
Xenopus tropicalis
XB-GENE-970084
I