Pavir.Ca00949 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ca00949 T356700_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.898 0.915
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.898 0.915
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.898 0.915
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.897 0.932
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.897 0.932
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.894 0.915
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.894 0.915
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.894 0.915
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.894 0.915
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.809 0.576
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.809 0.576
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.809 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00949.1.p WRKY 338 396

Links

Other WRKY family TFs
Other Panicum virgatum TFs

670 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI00179 Xenopus laevis AAI00179 I
AALB004535 Anopheles albimanus AALB004535 I
Aan_R003793 Calypte anna Aan_R003793 I
AARA007990 Anopheles arabiensis AARA007990 I
AATE016159 Anopheles atroparvus AATE016159 I
ACEP21720 Atta cephalotes ACEP21720 I
ACHR000726 Anopheles christyi ACHR000726 I
ACOM025626 Anopheles coluzzii ACOM025626 I
ACUA028400 Anopheles culicifacies ACUA028400 I
ACYPI008647 Acyrthosiphon pisum ACYPI008647 I
ACYPI48827 Acyrthosiphon pisum ACYPI48827 I
ADAC005077 Anopheles darlingi ADAC005077 I
ADIR007297 Anopheles dirus ADIR007297 I
AEPI009248 Anopheles epiroticus AEPI009248 I
AFAF018449 Anopheles farauti AFAF018449 I
Afo_R002068 Aptenodytes forsteri Afo_R002068 I
AFUN002061 Anopheles funestus AFUN002061 I
AGAP007376 Anopheles gambiae AGAP007376 I
Alligator_sinensis_CCG020430.1 Alligator sinensis Alligator_sinensis_CCG020430.1 I
AMAM001825 Anopheles maculatus AMAM001825 I
AMEC004928 Anopheles melas AMEC004928 I
AMEM003440 Anopheles merus AMEM003440 I
Aqu1.224085 Amphimedon queenslandica Aqu1.224085 I
AQUA004503 Anopheles quadriannulatus AQUA004503 I
ASTEI01331 Anopheles stephensi ASTEI01331 I
A_04341 Schistosoma haematobium A_04341 I
Brh_R001483 Buceros rhinoceros Brh_R001483 I
CAOG_07995 Capsaspora owczarzaki CAOG_07995 I
CapteG223273 Capitella teleta CapteG223273 I
Cflo_01621--XP_001121566.1_APIME Camponotus floridanus Cflo_01621--XP_001121566.1_APIME I
CGI_10002627 Crassostrea gigas CGI_10002627 I
CGI_10012001 Crassostrea gigas CGI_10012001 I
CLEC007231 Cimex lectularius CLEC007231 I
Cmyd_10011198 Chelonia mydas Cmyd_10011198 I
CPIJ010764 Culex quinquefasciatus CPIJ010764 I
CPIJ017497 Culex quinquefasciatus CPIJ017497 I
CpipJ_CPIJ010764 Culex pipiens CpipJ_CPIJ010764 I
CpipJ_CPIJ017497 Culex pipiens CpipJ_CPIJ017497 I
csin107256 Clonorchis sinensis csin107256 I
D915_02266 Fasciola hepatica D915_02266 I
DAPPUDRAFT_300656 Daphnia pulex DAPPUDRAFT_300656 I
ECANG7_02027 Echinococcus canadensis ECANG7_02027 I
ECPE_0000487901 Echinostoma caproni ECPE_0000487901 I
EmuJ_001061700 Echinococcus multilocularis EmuJ_001061700 I
NFYA Anolis carolinensis ENSACAG00000016527 I
ENSAMEG00000004435 Ailuropoda melanoleuca ENSAMEG00000004435 I
ENSAMXG00000002532 Astyanax mexicanus ENSAMXG00000002532 I
ENSAPLG00000002694 Anas platyrhynchos ENSAPLG00000002694 I
NFYA Bos taurus ENSBTAG00000009905 I
NFYA Canis familiaris ENSCAFG00000001580 I
ENSCING00000013482 Ciona intestinalis ENSCING00000013482 I
NFYA Callithrix jacchus ENSCJAG00000004074 I
NFYA Cavia porcellus ENSCPOG00000011146 I
ENSCSAG00000011196 Chlorocebus sabaeus ENSCSAG00000011196 I
ENSCSAVG00000007408 Ciona savignyi ENSCSAVG00000007408 I
nfyal Danio rerio ENSDARG00000001621 I
nfya Danio rerio ENSDARG00000042004 I
NFYA Dasypus novemcinctus ENSDNOG00000039692 I
Nfya Dipodomys ordii ENSDORG00000006450 I
NFYA Equus caballus ENSECAG00000007952 I
ENSEEUG00000006487 Erinaceus europaeus ENSEEUG00000006487 I
ENSETEG00000000629 Echinops telfairi ENSETEG00000000629 I
ENSFALG00000002949 Ficedula albicollis ENSFALG00000002949 I
NFYA Felis catus ENSFCAG00000027813 I
NFYA Homo sapiens ENSG00000001167 D
nfyal Gasterosteus aculeatus ENSGACG00000007867 I
NFYA Gallus gallus ENSGALG00000003247 I
NFYA Gorilla gorilla ENSGGOG00000008485 I
ENSGMOG00000001226 Gadus morhua ENSGMOG00000001226 I
ENSLACG00000015334 Latimeria chalumnae ENSLACG00000015334 I
NFYA Loxodonta africana ENSLAFG00000016570 I
ENSLOCG00000012292 Lepisosteus oculatus ENSLOCG00000012292 I
ENSMEUG00000005917 Macropus eugenii ENSMEUG00000005917 I
NFYA Meleagris gallopavo ENSMGAG00000010140 I
NFYA Microcebus murinus ENSMICG00000009686 I
NFYA Myotis lucifugus ENSMLUG00000008253 I
NFYA Macaca mulatta ENSMMUG00000021173 I
NFYA Monodelphis domestica ENSMODG00000013084 I
ENSMPUG00000013686 Mustela putorius furo ENSMPUG00000013686 I
Nfya Mus musculus ENSMUSG00000023994 D
ENSNLEG00000005028 Nomascus leucogenys ENSNLEG00000005028 I
NFYA Ornithorhynchus anatinus ENSOANG00000011990 I
ENSOARG00000000894 Ovis aries ENSOARG00000000894 I
NFYA Oryctolagus cuniculus ENSOCUG00000016869 I
NFYA Otolemur garnettii ENSOGAG00000002636 I
nfyal Oryzias latipes ENSORLG00000006088 I
ENSP00000345702 Macaca fascicularis ENSP00000345702 I
ENSP00000345702-D2 Bos grunniens ENSP00000345702-D2 I
ENSPANG00000009714 Papio anubis ENSPANG00000009714 I
NFYA Procavia capensis ENSPCAG00000011508 I
ENSPFOG00000012890 Poecilia formosa ENSPFOG00000012890 I
ENSPMAG00000000964 Petromyzon marinus ENSPMAG00000000964 I
ENSPPYG00000016588 Pongo abelii ENSPPYG00000016588 I
ENSPSIG00000013239 Pelodiscus sinensis ENSPSIG00000013239 I
NFYA Pan troglodytes ENSPTRG00000018146 I
NFYA Pteropus vampyrus ENSPVAG00000008318 I
Nfya Rattus norvegicus ENSRNOG00000012702 I
NFYA Sorex araneus ENSSARG00000009765 I
ENSSHAG00000017808 Sarcophilus harrisii ENSSHAG00000017808 I
ENSSSCG00000001600 Sus scrofa ENSSSCG00000001600 I
NFYA Sus scrofa ENSSSCG00000001611 I
ENSSSCG00000022941 Sus scrofa ENSSSCG00000022941 I
ENSSTOG00000023405 Ictidomys tridecemlineatus ENSSTOG00000023405 I
NFYA Taeniopygia guttata ENSTGUG00000001832 I
nfyal Tetraodon nigroviridis ENSTNIG00000015135 I
nfyal Takifugu rubripes ENSTRUG00000003925 I
ENSTSYG00000007176 Tarsius syrichta ENSTSYG00000007176 I
NFYA Tursiops truncatus ENSTTRG00000013394 I
NFYA Vicugna pacos ENSVPAG00000008028 I
ENSXMAG00000010069 Xiphophorus maculatus ENSXMAG00000010069 I
estExt_fgenesh2_pg.C_2670023 Branchiostoma floridae estExt_fgenesh2_pg.C_2670023 I
Nf-YA Drosophila melanogaster FBgn0035993 I
GA17755 Drosophila pseudoobscura FBgn0077764 I
GF24667 Drosophila ananassae FBgn0101660 I
GG14038 Drosophila erecta FBgn0106300 I
GH15528 Drosophila grimshawi FBgn0123000 I
GI16805 Drosophila mojavensis FBgn0139552 I
GJ12551 Drosophila virilis FBgn0199791 I
GE21241 Drosophila yakuba FBgn0238513 I
fgenesh2_pg.scaffold_208000070 Branchiostoma floridae fgenesh2_pg.scaffold_208000070 I
GB50732 Apis mellifera GB50732 I
HDID_0001056801 Hymenolepis diminuta HDID_0001056801 I
HelroG146050 Helobdella robusta HelroG146050 I
HHAL009455-PA Halyomorpha halys HHAL009455-PA I
HmN_000419600 Hymenolepis microstoma HmN_000419600 I
HNAJ_0000223001 Hymenolepis nana HNAJ_0000223001 I
Hsal_09569--XP_001121566.1_APIME Harpegnathos saltator Hsal_09569--XP_001121566.1_APIME I
ISCW017122 Ixodes scapularis ISCW017122 I
KGM_14733 Danaus plexippus KGM_14733 I
L596_g5816 Steinernema carpocapsae L596_g5816 I
L893_g18096 Steinernema glaseri L893_g18096 I
L898_g620 Steinernema monticolum L898_g620 I
LDEC000161 Leptinotarsa decemlineata LDEC000161 I
LotgiG96004 Lottia gigantea LotgiG96004 I
MDOA015095 Musca domestica MDOA015095 I
MESCA012339 Megaselia scalaris MESCA012339 I
MhA1_Contig2248.frz3.gene3 Meloidogyne hapla MhA1_Contig2248.frz3.gene3 I
Myotis_brandtii_NFYA_10015424 Myotis brandtii Myotis_brandtii_NFYA_10015424 I
nAv.1.0.1.g00776 Acanthocheilonema viteae nAv.1.0.1.g00776 I
nLs.2.1.2.g05605 Litomosoides sigmodontis nLs.2.1.2.g05605 I
nOo.2.0.1.g03339 Onchocerca ochengi nOo.2.0.1.g03339 I
nRc.2.0.1.g32781 Romanomermis culicivorax nRc.2.0.1.g32781 I
NV16776 Nasonia vitripennis NV16776 I
Ocbimv22027261m.g Octopus bimaculoides Ocbimv22027261m.g I
Ocbimv22031841m.g Octopus bimaculoides Ocbimv22031841m.g I
PHUM011400 Pediculus humanus PHUM011400 I
PPAI000251 Phlebotomus papatasi PPAI000251 I
Pvit_06013 Pogona vitticeps Pvit_06013 I
PXEA_0001432401 Protopolystoma xenopodis PXEA_0001432401 I
RPRC000951 Rhodnius prolixus RPRC000951 I
Sakowv30001860m.g Saccoglossus kowalevskii Sakowv30001860m.g I
Sakowv30044373m.g Saccoglossus kowalevskii Sakowv30044373m.g I
SCUD_0001212601 Schistosoma curassoni SCUD_0001212601 I
SINV17788 Solenopsis invicta SINV17788 I
Sjc_0096630 Schistosoma japonicum Sjc_0096630 I
Smp_030250 Schistosoma mansoni Smp_030250 I
SMRZ_0000504601 Schistosoma margrebowiei SMRZ_0000504601 I
SMTD_0000774701 Schistosoma mattheei SMTD_0000774701 I
SMU15029949 Schmidtea mediterranea SMU15029949 I
SNAPOd2T00008768001 Oikopleura dioica SNAPOd2T00008768001 I
SPPG_06102 Spizellomyces punctatus SPPG_06102 I
SPU_025589 Strongylocentrotus purpuratus SPU_025589 I
SPU_025737 Strongylocentrotus purpuratus SPU_025737 I
SROB_0000925201 Schistosoma rodhaini SROB_0000925201 I
SSLN_0000312901 Schistocephalus solidus SSLN_0000312901 I
T265_04195 Opisthorchis viverrini T265_04195 I
Tal_R012767 Tyto alba Tal_R012767 I
TC007453 Tribolium castaneum TC007453 I
tetur23g00370 Tetranychus urticae tetur23g00370 I
TRE_0001025401 Trichobilharzia regenti TRE_0001025401 I
WBGene00242147 Onchocerca volvulus WBGene00242147 I
nfya Xenopus tropicalis XB-GENE-942007 I
nfya.S Xenopus laevis XB-GENE-942013 I
YQE_10237 Dendroctonus ponderosae YQE_10237 I