CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_09596
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_09596
T358073_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_09596T0
Zinc cluster
9
42
KGCNTCRRRKKGRPVCGQCLKSRVECTGYERQRV
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YY1
Arabidopsis thaliana
AT4G06634
D
Bo00829s040
Brassica oleracea
Bo00829s040
I
Bostr.3877s0062
Boechera stricta
Bostr.3877s0062
I
Bra029186
Brassica rapa
Bra029186
I
Bra035726
Brassica rapa
Bra035726
I
Cagra.2657s0002
Capsella grandiflora
Cagra.2657s0002
I
Carubv10001157m.g
Capsella rubella
Carubv10001157m.g
I
Ca_00041
Cicer arietinum
Ca_00041
N
fgenesh2_kg.6__2821__AT4G06634.1
Arabidopsis lyrata
fgenesh2_kg.6__2821__AT4G06634.1
I
Thhalv10028723m.g
Eutrema salsugineum
Thhalv10028723m.g
I