CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CH063_12953
(
Colletotrichum higginsianum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CH063_12953
T363917_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
xlr-1
M02621_2.00
Neurospora crassa
NNNNWNNNN
NNNNWNNNN
PBM
Weirauch et al.(2014)
pTH9683
0.659
0.974
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF43180
Zinc cluster
97
135
RACDQCNQLRTKCDGQHPCAHCVEFGLGCEYIRERKKRG
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum higginsianum
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASTEI11547
Anopheles stephensi
ASTEI11547
N
CLEC007928
Cimex lectularius
CLEC007928
N
ECPE_0001091201
Echinostoma caproni
ECPE_0001091201
N
ECPE_0001414101
Echinostoma caproni
ECPE_0001414101
N
ENSDNOG00000034905
Dasypus novemcinctus
ENSDNOG00000034905
N
ENSDNOG00000046638
Dasypus novemcinctus
ENSDNOG00000046638
N
ENSETEG00000016379
Echinops telfairi
ENSETEG00000016379
N
HMGB2
Ornithorhynchus anatinus
ENSOANG00000029120
N
AABR07040430.1
Rattus norvegicus
ENSRNOG00000056486
N
HMGB1
Tupaia belangeri
ENSTBEG00000013046
N
ENSTGUG00000006267
Taeniopygia guttata
ENSTGUG00000006267
N
GL15829
Drosophila persimilis
FBgn0153433
N
Gfo_R010508
Geospiza fortis
Gfo_R010508
N
GPLIN_000727200
Globodera pallida
GPLIN_000727200
N
L596_g22130
Steinernema carpocapsae
L596_g22130
N
L892_g11245
Steinernema scapterisci
L892_g11245
N
MDOA008389
Musca domestica
MDOA008389
N
MESCA001453
Megaselia scalaris
MESCA001453
N
Ocbimv22036873m.g
Octopus bimaculoides
Ocbimv22036873m.g
N
T265_12733
Opisthorchis viverrini
T265_12733
N
TRE_0001071501
Trichobilharzia regenti
TRE_0001071501
N