CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_10320
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_10320
T364510_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH80868
Zinc cluster
36
80
RACVSCRLRKTRCDLDYGGNPGIPPCRRCVREQKECVLATSRRGG
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava37862.valid.m1
Manihot esculenta
cassava37862.valid.m1
I
0.000
chr2.CM0002.120.nc
Lotus japonicus
chr2.CM0002.120.nc
I
0.000
Ciclev10032356m.g
Citrus clementina
Ciclev10032356m.g
I
0.000
Cla006707
Citrullus lanatus
Cla006707
I
0.000
Cucsa.136730
Cucumis sativus
Cucsa.136730
I
0.000
Eucgr.J00190
Eucalyptus grandis
Eucgr.J00190
I
0.000
evm.TU.supercontig_19.156
Carica papaya
evm.TU.supercontig_19.156
I
0.000
gene21000-v1.0-hybrid
Fragaria vesca
gene21000-v1.0-hybrid
I
0.000
GLYMA02G42570
Glycine max
GLYMA02G42570
I
0.000
GLYMA11G35480
Glycine max
GLYMA11G35480
I
0.000
GLYMA18G02940
Glycine max
GLYMA18G02940
I
0.000
Gorai.012G078100
Gossypium raimondii
Gorai.012G078100
I
0.000
Lus10007502.g
Linum usitatissimum
Lus10007502.g
I
0.000
Lus10028978.g
Linum usitatissimum
Lus10028978.g
I
0.000
orange1.1g023629m.g
Citrus sinensis
orange1.1g023629m.g
I
0.000
PGSC0003DMG400027725
Solanum tuberosum
PGSC0003DMG400027725
I
0.000
PK01630.1
Cannabis sativa
PK01630.1
D
0.000
Pm018950
Prunus mume
Pm018950
I
0.000
POPTR_0008s07090
Populus trichocarpa
POPTR_0008s07090
I
0.000
POPTR_0010s19400
Populus trichocarpa
POPTR_0010s19400
I
0.000
PRUPE_ppa010134mg
Prunus persica
PRUPE_ppa010134mg
I
0.000
SapurV1A.0061s0470
Salix purpurea
SapurV1A.0061s0470
I
0.000
Solyc03g095980.2
Solanum lycopersicum
Solyc03g095980.2
I
0.000
Solyc06g051260.2
Solanum lycopersicum
Solyc06g051260.2
N
0.000
TCM_042475
Theobroma cacao
TCM_042475
I
0.000
VIT_13s0067g01350
Vitis vinifera
VIT_13s0067g01350
I
0.000