GNLVRS01_PISO0N20935g (Millerozyma farinosa)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GNLVRS01_PISO0N20935g T369922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.547 0.650
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.547 0.650
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.547 0.650
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE87169 Zinc cluster 11 50

Links

Other Zinc cluster family TFs
Other Millerozyma farinosa TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh-pir_contig_1013-abinit-gene-0.11 Pythium irregulare fgenesh-pir_contig_1013-abinit-gene-0.11 N 0.000
fgenesh_scip_prom.28083.3870 Phytophthora lateralis fgenesh_scip_prom.28083.3870 N 0.000
fgenesh_scip_prom.46568.4280 Phytophthora kernoviae fgenesh_scip_prom.46568.4280 N 0.000
gw1.23.237.1 Phytophthora capsici gw1.23.237.1 N 0.000
maker-pag1_scaffold_26-snap-gene-0.60 Pythium aphanidermatum maker-pag1_scaffold_26-snap-gene-0.60 N 0.000
maker-pag1_scaffold_26-snap-gene-0.61 Pythium aphanidermatum maker-pag1_scaffold_26-snap-gene-0.61 N 0.000
maker-pag1_scaffold_571-snap-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_571-snap-gene-0.7 N 0.000
maker-par_contig_4456-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_4456-fgenesh-gene-0.0 N 0.000
maker-par_contig_6341-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_6341-snap-gene-0.1 N 0.000
maker-par_contig_6510-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_6510-snap-gene-0.1 N 0.000
maker-par_contig_926-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_926-fgenesh-gene-0.0 N 0.000
maker-piw_contig_1851-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1851-snap-gene-0.3 N 0.000
maker-piw_contig_496-snap-gene-0.3 Pythium iwayamai maker-piw_contig_496-snap-gene-0.3 N 0.000
maker-pve_contig_476-snap-gene-0.24 Pythium vexans maker-pve_contig_476-snap-gene-0.24 N 0.000
Phyra75006 Phytophthora ramorum Phyra75006 N 0.000
Physo143270 Phytophthora sojae Physo143270 N 0.000
PITG_12841 Phytophthora infestans PITG_12841 N 0.000
PYU1_G008786 Pythium ultimum PYU1_G008786 N 0.000