CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_33395
(
Serendipita vermifera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
M408DRAFT_33395
T372588_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM26157
Zinc cluster
30
67
RACDRCRRRRIRCEESTPCASCVAAGSPCTFEEPGKKS
Links
Other
Zinc cluster
family TFs
Other
Serendipita vermifera
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava19449.valid.m1
Manihot esculenta
cassava19449.valid.m1
N
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
GLYMA13G41240
Glycine max
GLYMA13G41240
N
Gorai.001G111600
Gossypium raimondii
Gorai.001G111600
N
Gorai.003G130500
Gossypium raimondii
Gorai.003G130500
N
Lus10004968.g
Linum usitatissimum
Lus10004968.g
N
MDP0000247940
Malus domestica
MDP0000247940
N
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
Pm000718
Prunus mume
Pm000718
N
Pm027957
Prunus mume
Pm027957
N
POPTR_0001s24860
Populus trichocarpa
POPTR_0001s24860
N
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
SapurV1A.0040s0480
Salix purpurea
SapurV1A.0040s0480
N
SapurV1A.0041s0170
Salix purpurea
SapurV1A.0041s0170
N
TCM_041814
Theobroma cacao
TCM_041814
N
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N