CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MELLADRAFT_118331
(
Melampsora laricipopulina
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
MELLADRAFT_118331
T374195_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_09159
M02581_2.00
Puccinia graminis
WTCGGRAN
NTYCCGAW
PBM
Weirauch et al.(2014)
pTH7836
0.548
0.821
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGF99273
Zinc cluster
108
148
RACAHCQKAHLTCDDGRPCRRCTRRGLGASCADGFRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Melampsora laricipopulina
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BOTBODRAFT_25699
Botryobasidium botryosum
BOTBODRAFT_25699
N
0.572
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
0.595
FOMPIDRAFT_1127908
Fomitopsis pinicola
FOMPIDRAFT_1127908
N
0.555
gw1.1.790.1
Sporobolomyces roseus
gw1.1.790.1
N
0.555
M404DRAFT_15475
Pisolithus tinctorius
M404DRAFT_15475
N
0.552
MVLG_05637
Microbotryum violaceum
MVLG_05637
N
0.555
PaG_02922
Pseudozyma aphidis
PaG_02922
I
0.553
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
0.625
PGTG_09159
Puccinia graminis
PGTG_09159
D
0.548
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
0.553
PISMIDRAFT_7910
Pisolithus microcarpus
PISMIDRAFT_7910
N
0.552
PSEUBRA_SCAF2g02944
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02944
I
0.553
PTTG_02951
Puccinia triticina
PTTG_02951
I
0.548
RHTO_04446
Rhodosporidium toruloides
RHTO_04446
N
0.555
SCLCIDRAFT_1208446
Scleroderma citrinum
SCLCIDRAFT_1208446
N
0.552
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
0.595
sr10662
Sporisorium reilianum
sr10662
I
0.553
UM01925
Ustilago maydis
UM01925
I
0.553