PAS_chr4_0540 (Komagataella pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PAS_chr4_0540 T376942_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_00689
M11469_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBALL_Q2
0.560 0.564
ANIA_00689
M11470_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCA_Q2
0.560 0.564
ANIA_00689
M11471_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCB_Q2
0.560 0.564
CAT8
M00102_2.00
Saccharomyces cerevisiae
NNNCCGGAN

NTCCGGNNN
PBM
Badis et al.(2008)
CAT8_4532
0.548 0.590
CAT8
M07529_2.00
Saccharomyces cerevisiae
CCGGRN

NYCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1
0.548 0.590
CAT8
M08688_2.00
Saccharomyces cerevisiae
NCGGNNNDVNGGNN

NNCCNBHNNNCCGN
Misc
DeBoer et al.(2011)
YMR280C_33
0.548 0.590
CAT8
M11485_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6_01
0.548 0.590
CAT8
M11486_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6
0.548 0.590
acu-15
M02616_2.00
Neurospora crassa
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7801
0.543 0.538
acu-15
M02617_2.00
Neurospora crassa
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8900
0.543 0.538
FGRRES_09921
M02577_2.00
Fusarium graminearum
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7794
0.543 0.513
SIP4
M00089_2.00
Saccharomyces cerevisiae
NNNNNNCSGN

NCSGNNNNNN
PBM
Badis et al.(2008)
SIP4_2067
0.542 0.667
SIP4
M01582_2.00
Saccharomyces cerevisiae
NNNNNNNVVD

HBBNNNNNNN
PBM
Zhu et al.(2009)
Sip4
0.542 0.667
SIP4
M07516_2.00
Saccharomyces cerevisiae
YYCGGRR

YYCCGRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1
0.542 0.667
SIP4
M08669_2.00
Saccharomyces cerevisiae
NCGGNYNVMYSGR

YCSRKBNRNCCGN
Misc
DeBoer et al.(2011)
YJL089W_2067
0.542 0.667
SIP4
M08670_2.00
Saccharomyces cerevisiae
YYCGGRR

YYCCGRR
Misc
DeBoer et al.(2011)
YJL089W_573
0.542 0.667
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY71800 Zinc cluster 25 63

Links

Other Zinc cluster family TFs
Other Komagataella pastoris TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
11616_YJL089W Saccharomyces paradoxus 11616_YJL089W I 0.542
11867_YJL089W Saccharomyces mikatae 11867_YJL089W I 0.542
12726_YJL089W Saccharomyces bayanus 12726_YJL089W I 0.542
17487_YMR280C Saccharomyces mikatae 17487_YMR280C I 0.548
17891_YMR280C Saccharomyces paradoxus 17891_YMR280C I 0.548
19463_YMR280C Saccharomyces bayanus 19463_YMR280C I 0.548
A1O1_06777 Capronia coronata A1O1_06777 I 0.560
A1O3_10373 Capronia epimyces A1O3_10373 I 0.560
A1O5_07453 Cladophialophora psammophila A1O5_07453 I 0.560
A1O7_09708 Cladophialophora yegresii A1O7_09708 I 0.560
A1O9_05407 Exophiala aquamarina A1O9_05407 I 0.585
AACERI_AaceriABL121C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL121C I 0.548
AACERI_AaceriAFR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR096W I 0.626
AB00158.1 Alternaria brassicicola AB00158.1 I 0.542
AB00291.1 Alternaria brassicicola AB00291.1 I 0.568
ACRE_084730 Acremonium chrysogenum ACRE_084730 I 0.560
AGOS_ABL121C Ashbya gossypii AGOS_ABL121C I 0.548
AGOS_AFR096W Ashbya gossypii AGOS_AFR096W I 0.626
AOL_s00173g90 Arthrobotrys oligospora AOL_s00173g90 I 0.551
ARB_01763 Arthroderma benhamiae ARB_01763 I 0.551
AUEXF2481DRAFT_25000 Aureobasidium subglaciale AUEXF2481DRAFT_25000 I 0.551
BAUCODRAFT_120474 Baudoinia compniacensis BAUCODRAFT_120474 I 0.560
Bcin14g04080 Botrytis cinerea Bcin14g04080 I 0.568
BDDG_03989 Blastomyces dermatitidis BDDG_03989 I 0.543
BN7_1590 Wickerhamomyces ciferrii BN7_1590 I 0.609
ACLA_021920 Aspergillus clavatus CADACLAG00001871 I 0.560
CADAFLAG00003675 Aspergillus flavus CADAFLAG00003675 I 0.560
AFUA_1G13510 Aspergillus fumigatus CADAFUAG00007202 I 0.560
CADANGAG00006980 Aspergillus niger CADANGAG00006980 I 0.560
ANIA_00689 Aspergillus nidulans CADANIAG00001981 D 0.560
CADAORAG00006095 Aspergillus oryzae CADAORAG00006095 I 0.560
ATEG_00558 Aspergillus terreus CADATEAG00006881 I 0.560
NFIA_011990 Neosartorya fischeri CADNFIAG00001575 I 0.560
CAGL0L03377g Candida glabrata CAGL0L03377g I 0.587
CAGL0M03025g Candida glabrata CAGL0M03025g I 0.548
CANTEDRAFT_117377 Candida tenuis CANTEDRAFT_117377 I 0.548
CCM_00520 Cordyceps militaris CCM_00520 I 0.543
CFIO01_04476 Colletotrichum fioriniae CFIO01_04476 I 0.568
CGGC5_6484 Colletotrichum gloeosporioides CGGC5_6484 I 0.543
CHGG_00728 Chaetomium globosum CHGG_00728 I 0.543
CIMG_09602 Coccidioides immitis CIMG_09602 I 0.543
CLUG_01305 Candida lusitaniae CLUG_01305 I 0.548
CLUG_01305 Clavispora lusitaniae CLUG_01305 I 0.548
CMQ_3248 Grosmannia clavigera CMQ_3248 I 0.543
Cob_09661 Colletotrichum orbiculare Cob_09661 I 0.543
COCC4DRAFT_156048 Bipolaris maydis COCC4DRAFT_156048 I 0.542
COCC4DRAFT_160202 Bipolaris maydis COCC4DRAFT_160202 I 0.568
COCCADRAFT_3273 Bipolaris zeicola COCCADRAFT_3273 I 0.568
COCCADRAFT_94279 Bipolaris zeicola COCCADRAFT_94279 I 0.542
COCMIDRAFT_23407 Bipolaris oryzae COCMIDRAFT_23407 I 0.568
COCMIDRAFT_80931 Bipolaris oryzae COCMIDRAFT_80931 I 0.542
COCSADRAFT_166678 Bipolaris sorokiniana COCSADRAFT_166678 I 0.542
COCSADRAFT_243527 Bipolaris sorokiniana COCSADRAFT_243527 I 0.568
COCVIDRAFT_103972 Bipolaris victoriae COCVIDRAFT_103972 I 0.568
COCVIDRAFT_83730 Bipolaris victoriae COCVIDRAFT_83730 I 0.542
CORT_0A06750 Candida orthopsilosis CORT_0A06750 I 0.573
CORT_0B04760 Candida orthopsilosis CORT_0B04760 I 0.601
CPAG_00982 Candida parapsilosis CPAG_00982 I 0.601
CPAG_01919 Candida parapsilosis CPAG_01919 I 0.573
CPC735_024080 Coccidioides posadasii CPC735_024080 I 0.543
CPUR_03154 Claviceps purpurea CPUR_03154 I 0.543
CSUB01_03093 Colletotrichum sublineola CSUB01_03093 I 0.543
CTHT_0052680 Chaetomium thermophilum CTHT_0052680 I 0.543
DEHA2F04202g Debaryomyces hansenii DEHA2F04202g I 0.548
DEHA2G02090g Debaryomyces hansenii DEHA2G02090g I 0.626
DOTSEDRAFT_67755 Dothistroma septosporum DOTSEDRAFT_67755 I 0.568
DRE_06992 Drechslerella stenobrocha DRE_06992 I 0.551
Ecym_4616 Eremothecium cymbalariae Ecym_4616 I 0.548
Ecym_6340 Eremothecium cymbalariae Ecym_6340 I 0.626
estExt_fgenesh1_pm.C_60502 Cryphonectria parasitica estExt_fgenesh1_pm.C_60502 I 0.560
estExt_fgenesh2_pg.C_10678 Neurospora discreta estExt_fgenesh2_pg.C_10678 I 0.543
estExt_Genewise1.C_10162 Mycosphaerella fijiensis estExt_Genewise1.C_10162 I 0.543
estExt_Genewise1Plus.C_11533 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11533 I 0.568
estExt_Genewise1Plus.C_chr_12372 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12372 I 0.568
EURHEDRAFT_525504 Aspergillus ruber EURHEDRAFT_525504 I 0.543
e_gw1.2.33.1 Cochliobolus heterostrophus C5 e_gw1.2.33.1 I 0.542
e_gw1.5.1078.1 Nectria haematococca e_gw1.5.1078.1 I 0.543
F503_06102 Ophiostoma piceae uamh F503_06102 I 0.543
FFUJ_07541 Fusarium fujikuroi FFUJ_07541 I 0.543
fgenesh1_pg.C_chr_4.1000626 Pichia stipitis fgenesh1_pg.C_chr_4.1000626 I 0.601
fgenesh1_pm.00083_#_404 Aspergillus carbonarius fgenesh1_pm.00083_#_404 I 0.560
FGRRES_09921 Fusarium graminearum FGRRES_09921 D 0.543
FOXG_05502 Fusarium oxysporum FOXG_05502 I 0.543
FPSE_03099 Fusarium pseudograminearum FPSE_03099 I 0.543
FVEG_02639 Fusarium verticillioides FVEG_02639 I 0.543
G647_08575 Cladophialophora carrionii G647_08575 I 0.560
GGTG_09932 Gaeumannomyces graminis GGTG_09932 I 0.560
GLRG_10212 Colletotrichum graminicola GLRG_10212 I 0.543
GMDG_03942 Pseudogymnoascus destructans GMDG_03942 I 0.543
GMDG_06993 Pseudogymnoascus destructans GMDG_06993 I 0.560
GNLVRS01_PISO0I17586g Millerozyma farinosa GNLVRS01_PISO0I17586g I 0.578
GNLVRS01_PISO0J19347g Millerozyma farinosa GNLVRS01_PISO0J19347g I 0.578
GNLVRS01_PISO0K20118g Millerozyma farinosa GNLVRS01_PISO0K20118g I 0.601
GNLVRS01_PISO0L20119g Millerozyma farinosa GNLVRS01_PISO0L20119g I 0.601
GSTUM_00005465001 Tuber melanosporum GSTUM_00005465001 I 0.543
gwh1.2.1.110.1 Pichia stipitis gwh1.2.1.110.1 I 0.573
H101_04897 Trichophyton interdigitale H101_04897 I 0.551
H102_08795 Trichophyton rubrum H102_08795 I 0.551
H105_08820 Trichophyton soudanense H105_08820 I 0.551
HCBG_02970 Histoplasma capsulatum HCBG_02970 I 0.543
HCBG_04348 Histoplasma capsulatum HCBG_04348 I 0.546
HMPREF1120_01646 Exophiala dermatitidis HMPREF1120_01646 I 0.560
HMPREF1541_02579 Cyphellophora europaea HMPREF1541_02579 I 0.560
HMPREF1624_05843 Sporothrix schenckii HMPREF1624_05843 I 0.543
HPODL_02294 Ogataea parapolymorpha HPODL_02294 N 0.564
JL09_g2790 Pichia kudriavzevii JL09_g2790 N 0.581
KAFR_0A01480 Kazachstania africana KAFR_0A01480 I 0.584
KAFR_0B03950 Kazachstania africana KAFR_0B03950 I 0.548
KLLA0_D01452g Kluyveromyces lactis KLLA0_D01452g I 0.586
KLLA0_F14322g Kluyveromyces lactis KLLA0_F14322g I 0.609
KLTH0C03762g Lachancea thermotolerans KLTH0C03762g I 0.548
KLTH0C03762g Kluyveromyces thermotolerans KLTH0C03762g I 0.548
KLTH0D03564g Lachancea thermotolerans KLTH0D03564g I 0.604
KLTH0D03564g Kluyveromyces thermotolerans KLTH0D03564g I 0.604
KNAG_0B01840 Kazachstania naganishii KNAG_0B01840 I 0.578
Kpol_1016p20 Vanderwaltozyma polyspora Kpol_1016p20 I 0.601
KUCA_T00004275001 Kuraishia capsulata KUCA_T00004275001 I 0.548
KUCA_T00004675001 Kuraishia capsulata KUCA_T00004675001 I 0.602
Kwal_10232 Kluyveromyces waltii Kwal_10232 I 0.548
LALA0_S03e00276g Lachancea lanzarotensis LALA0_S03e00276g I 0.548
LALA0_S08e06744g Lachancea lanzarotensis LALA0_S08e06744g I 0.569
LELG_00667 Lodderomyces elongisporus LELG_00667 I 0.573
LELG_01997 Lodderomyces elongisporus LELG_01997 I 0.601
LEMA_P068880.1 Leptosphaeria maculans LEMA_P068880.1 I 0.542
LEMA_P079800.1 Leptosphaeria maculans LEMA_P079800.1 I 0.568
M437DRAFT_48354 Aureobasidium melanogenum M437DRAFT_48354 I 0.551
M438DRAFT_266991 Aureobasidium pullulans M438DRAFT_266991 I 0.551
MAC_01154 Metarhizium acridum MAC_01154 I 0.543
MAJ_04331 Metarhizium majus MAJ_04331 I 0.543
MAM_07132 Metarhizium album MAM_07132 I 0.543
MANI_010830 Metarhizium anisopliae MANI_010830 I 0.543
MAPG_02877 Magnaporthe poae MAPG_02877 I 0.560
MBM_00482 Marssonina brunnea MBM_00482 I 0.543
MBR_01591 Metarhizium brunneum MBR_01591 I 0.543
MCYG_02995 Microsporum canis MCYG_02995 I 0.551
MCYG_02995 Arthroderma otae MCYG_02995 I 0.551
MGG_04108 Magnaporthe oryzae MGG_04108 I 0.560
MGU_02269 Metarhizium guizhouense MGU_02269 I 0.543
MGYG_00169 Microsporum gypseum MGYG_00169 I 0.551
MPH_02048 Macrophomina phaseolina MPH_02048 I 0.551
MYCFIDRAFT_47796 Pseudocercospora fijiensis MYCFIDRAFT_47796 I 0.543
Mycgr3G66501 Zymoseptoria tritici Mycgr3G66501 I 0.568
MYCTH_2300537 Myceliophthora thermophila MYCTH_2300537 I 0.543
NCAS_0A09410 Naumovozyma castellii NCAS_0A09410 N 0.543
NCAS_0C00390 Naumovozyma castellii NCAS_0C00390 I 0.548
acu-15 Neurospora crassa NCU06656 D 0.543
NDAI_0K00390 Naumovozyma dairenensis NDAI_0K00390 I 0.548
NechaG41465 Fusarium solani NechaG41465 I 0.543
NEUTE1DRAFT_127465 Neurospora tetrasperma NEUTE1DRAFT_127465 I 0.543
OCS_05092 Ophiocordyceps sinensis OCS_05092 I 0.543
OIDMADRAFT_40403 Oidiodendron maius OIDMADRAFT_40403 I 0.543
PAAG_03745 Paracoccidioides sp lutzii PAAG_03745 I 0.546
PAAG_11872 Paracoccidioides sp lutzii PAAG_11872 I 0.543
PABG_00794 Paracoccidioides brasiliensis PABG_00794 I 0.546
PABG_04235 Paracoccidioides brasiliensis PABG_04235 I 0.543
PAS_chr2-1_0757 Komagataella pastoris PAS_chr2-1_0757 I 0.548
Pc13g12510 Penicillium chrysogenum Pc13g12510 I 0.543
PCH_Pc13g12510 Penicillium rubens PCH_Pc13g12510 I 0.543
PDE_00198 Penicillium oxalicum PDE_00198 I 0.560
PDIP_26660 Penicillium digitatum PDIP_26660 I 0.543
PEX1_082400 Penicillium expansum PEX1_082400 I 0.543
PFICI_07248 Pestalotiopsis fici PFICI_07248 I 0.543
PGUG_00677 Candida guilliermondii PGUG_00677 N 0.589
PGUG_00677 Meyerozyma guilliermondii PGUG_00677 N 0.589
PGUG_01292 Candida guilliermondii PGUG_01292 I 0.556
PGUG_01292 Meyerozyma guilliermondii PGUG_01292 I 0.556
PICST_31755 Scheffersomyces stipitis PICST_31755 I 0.601
PICST_622 Scheffersomyces stipitis PICST_622 I 0.573
PITC_056580 Penicillium italicum PITC_056580 I 0.543
PMAA_067280 Talaromyces marneffei PMAA_067280 I 0.560
PMAA_067280 Penicillium marneffei PMAA_067280 I 0.560
PODANS_2_2140 Podospora anserina PODANS_2_2140 I 0.543
PTRG_09927 Pyrenophora triticirepentis PTRG_09927 I 0.568
PTRG_10684 Pyrenophora triticirepentis PTRG_10684 I 0.542
PTT_11750 Pyrenophora teres PTT_11750 I 0.568
PTT_14070 Pyrenophora teres PTT_14070 I 0.542
PV04_10755 Capronia semiimmersa PV04_10755 I 0.560
PV05_02803 Exophiala xenobiotica PV05_02803 I 0.585
PV06_08403 Exophiala oligosperma PV06_08403 I 0.560
PV07_12426 Cladophialophora immunda PV07_12426 I 0.560
PV08_06719 Exophiala spinifera PV08_06719 I 0.560
PV09_05217 Verruconis gallopava PV09_05217 I 0.568
PV10_00718 Exophiala mesophila PV10_00718 I 0.575
PV10_01410 Exophiala mesophila PV10_01410 I 0.560
PV11_05983 Exophiala sideris PV11_05983 I 0.543
PVAR5_8553 Byssochlamys spectabilis PVAR5_8553 I 0.543
S40285_06249 Stachybotrys chlorohalonata S40285_06249 I 0.543
S40288_04897 Stachybotrys chartarum S40288_04897 I 0.543
SAKL0D01342g Lachancea kluyveri SAKL0D01342g I 0.548
SAKL0D05654g Lachancea kluyveri SAKL0D05654g I 0.618
Scas_Contig696.44 Saccharomyces castellii Scas_Contig696.44 I 0.548
Scas_Contig711.31 Saccharomyces castellii Scas_Contig711.31 N 0.543
SEPMUDRAFT_146690 Sphaerulina musiva SEPMUDRAFT_146690 I 0.543
SETTUDRAFT_182790 Setosphaeria turcica SETTUDRAFT_182790 I 0.568
SETTUDRAFT_41285 Setosphaeria turcica SETTUDRAFT_41285 I 0.542
SKUD_164001 Saccharomyces kudriavzevii SKUD_164001 I 0.567
SKUD_207003 Saccharomyces kudriavzevii SKUD_207003 I 0.548
SMAC_06552 Sordaria macrospora SMAC_06552 I 0.543
SNOG_09792 Stagonospora nodorum SNOG_09792 I 0.542
SNOG_09792 Phaeosphaeria nodorum SNOG_09792 I 0.542
SNOG_10771 Stagonospora nodorum SNOG_10771 I 0.568
SNOG_10771 Phaeosphaeria nodorum SNOG_10771 I 0.568
SPAPADRAFT_154694 Spathaspora passalidarum SPAPADRAFT_154694 I 0.602
SPBR_00143 Sporothrix brasiliensis SPBR_00143 I 0.543
SS1G_10339 Sclerotinia sclerotiorum SS1G_10339 I 0.568
TBLA_0D05420 Tetrapisispora blattae TBLA_0D05420 I 0.578
TDEL_0B00530 Torulaspora delbrueckii TDEL_0B00530 I 0.548
TDEL_0D01450 Torulaspora delbrueckii TDEL_0D01450 I 0.550
TEQG_08271 Trichophyton equinum TEQG_08271 I 0.551
TESG_07986 Trichophyton tonsurans TESG_07986 I 0.551
THITE_2106669 Thielavia terrestris THITE_2106669 I 0.543
TPHA_0I02820 Tetrapisispora phaffii TPHA_0I02820 I 0.651
TRIATDRAFT_221379 Trichoderma atroviride TRIATDRAFT_221379 I 0.568
TRIREDRAFT_49232 Trichoderma reesei TRIREDRAFT_49232 I 0.543
TRIVIDRAFT_166933 Trichoderma virens TRIVIDRAFT_166933 I 0.543
TRV_01331 Trichophyton verrucosum TRV_01331 I 0.551
TSTA_087380 Talaromyces stipitatus TSTA_087380 I 0.560
U727_0043367091 Penicillium solitum U727_0043367091 I 0.543
UCREL1_9979 Eutypa lata UCREL1_9979 I 0.560
UCRNP2_919 Neofusicoccum parvum UCRNP2_919 I 0.551
UCRPA7_1587 Togninia minima UCRPA7_1587 I 0.543
UREG_04565 Uncinocarpus reesii UREG_04565 I 0.543
UV8b_3025 Ustilaginoidea virens UV8b_3025 I 0.543
V499_01421 Pseudogymnoascus pannorum V499_01421 I 0.543
V499_08426 Pseudogymnoascus pannorum V499_08426 I 0.560
VDAG_00301 Verticillium dahliae VDAG_00301 I 0.543
VDBG_00686 Verticillium albo atrum VDBG_00686 I 0.543
VDBG_00686 Verticillium alfalfae VDBG_00686 I 0.543
VHEMI01993 Torrubiella hemipterigena VHEMI01993 I 0.543
W97_03320 Coniosporium apollinis W97_03320 I 0.568
W97_07114 Coniosporium apollinis W97_07114 I 0.560
X797_002104 Metarhizium robertsii X797_002104 I 0.543
XP_002491690.1 Pichia pastoris XP_002491690.1 I 0.548
XP_002493979.1 Pichia pastoris XP_002493979.1 I 0.683
YALI0_C19151g Yarrowia lipolytica YALI0_C19151g I 0.584
SIP4 Saccharomyces cerevisiae YJL089W D 0.542
CAT8 Saccharomyces cerevisiae YMR280C D 0.548
Z517_12110 Fonsecaea pedrosoi Z517_12110 I 0.560
Z518_06304 Rhinocladiella mackenziei Z518_06304 I 0.560
Z519_06020 Cladophialophora bantiana Z519_06020 I 0.560
ZBAI_02613 Zygosaccharomyces bailii ZBAI_02613 I 0.609
ZBAI_07009 Zygosaccharomyces bailii ZBAI_07009 I 0.609
ZYRO0G15136g Zygosaccharomyces rouxii ZYRO0G15136g I 0.601