fgenesh1_pg.sca_76_chr13_2_0000013 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_76_chr13_2_0000013 T390281_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ada-3
M01421_2.00 		Neurospora crassa
VCKCGCGA
TCGCGMGB		 PBM
Lambert et al.(2019)
pTH8620 		0.606 0.684
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_76_chr13_2_0000013 Zinc cluster 52 89

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29904.m002956 Ricinus communis 29904.m002956 N
29908.m006098 Ricinus communis 29908.m006098 N
30054.m000819 Ricinus communis 30054.m000819 N
30128.m008737 Ricinus communis 30128.m008737 N
AC233899.1_FG002 Zea mays AC233899.1_FG002 N
AMTR_s00008p00198780 Amborella trichopoda AMTR_s00008p00198780 N
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N
Aquca_010_00112 Aquilegia coerulea Aquca_010_00112 N
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N
AT1G22490 Arabidopsis thaliana AT1G22490 N
BHLH96 Arabidopsis thaliana AT1G72210 N
FAMA Arabidopsis thaliana AT3G24140 N
BHLH67 Arabidopsis thaliana AT3G61950 N
BGIOSGA005582 Oryza indica BGIOSGA005582 N
BGIOSGA026779 Oryza indica BGIOSGA026779 N
BGIOSGA030936 Oryza indica BGIOSGA030936 N
BGIOSGA032814 Oryza indica BGIOSGA032814 N
Bo1g101110 Brassica oleracea Bo1g101110 N
Bo2g075510 Brassica oleracea Bo2g075510 N
Bo3g082010 Brassica oleracea Bo3g082010 N
Bo5g038570 Brassica oleracea Bo5g038570 N
Bo6g092570 Brassica oleracea Bo6g092570 N
Bo6g114730 Brassica oleracea Bo6g114730 N
Bo7g037540 Brassica oleracea Bo7g037540 N
Bo7g057920 Brassica oleracea Bo7g057920 N
Bo8g071490 Brassica oleracea Bo8g071490 N
Bo8g097470 Brassica oleracea Bo8g097470 N
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N
Bra001929 Brassica rapa Bra001929 N
Bra003886 Brassica rapa Bra003886 N
Bra007644 Brassica rapa Bra007644 N
Bra008017 Brassica rapa Bra008017 N
Bra012329 Brassica rapa Bra012329 N
Bra016080 Brassica rapa Bra016080 N
Bra016377 Brassica rapa Bra016377 N
Bra028357 Brassica rapa Bra028357 N
Bra040856 Brassica rapa Bra040856 N
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N
Carubv10011476m.g Capsella rubella Carubv10011476m.g N
Carubv10013821m.g Capsella rubella Carubv10013821m.g N
Carubv10018614m.g Capsella rubella Carubv10018614m.g N
Carubv10020657m.g Capsella rubella Carubv10020657m.g N
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N
cassava27750.m1 Manihot esculenta cassava27750.m1 N
cassava27856.m1 Manihot esculenta cassava27856.m1 N
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N
cassava34492.m1 Manihot esculenta cassava34492.m1 N
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N
Ca_01181 Cicer arietinum Ca_01181 N
Ca_12363 Cicer arietinum Ca_12363 N
Ca_16010 Cicer arietinum Ca_16010 N
Ca_28086 Cicer arietinum Ca_28086 N
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N
Ciclev10026131m.g Citrus clementina Ciclev10026131m.g N
Cla005338 Citrullus lanatus Cla005338 N
Cla020173 Citrullus lanatus Cla020173 N
Cla021744 Citrullus lanatus Cla021744 N
Cla022458 Citrullus lanatus Cla022458 N
Cucsa.091670 Cucumis sativus Cucsa.091670 N
Cucsa.160250 Cucumis sativus Cucsa.160250 N
Cucsa.163550 Cucumis sativus Cucsa.163550 N
Cucsa.256420 Cucumis sativus Cucsa.256420 N
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N
fgenesh1_pm.C_scaffold_6002861 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002861 N
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N
GLYMA01G23230 Glycine max GLYMA01G23230 N
GLYMA02G14290 Glycine max GLYMA02G14290 N
GLYMA02G37313 Glycine max GLYMA02G37313 N
GLYMA03G39990 Glycine max GLYMA03G39990 N
GLYMA04G10630 Glycine max GLYMA04G10630 N
GLYMA06G10470 Glycine max GLYMA06G10470 N
GLYMA06G35330 Glycine max GLYMA06G35330 N
GLYMA08G36590 Glycine max GLYMA08G36590 N
GLYMA10G29760 Glycine max GLYMA10G29760 N
GLYMA13G08740 Glycine max GLYMA13G08740 N
GLYMA14G35560 Glycine max GLYMA14G35560 N
GLYMA19G42520 Glycine max GLYMA19G42520 N
GLYMA20G37550 Glycine max GLYMA20G37550 N
Gorai.005G094800 Gossypium raimondii Gorai.005G094800 N
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N
Gorai.013G204300 Gossypium raimondii Gorai.013G204300 N
GRMZM2G008691 Zea mays GRMZM2G008691 N
GRMZM2G015666 Zea mays GRMZM2G015666 N
GRMZM2G045883 Zea mays GRMZM2G045883 N
GRMZM2G082586 Zea mays GRMZM2G082586 N
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N
LPERR02G27220 Leersia perrieri LPERR02G27220 N
LPERR09G09700 Leersia perrieri LPERR09G09700 N
LPERR10G05620 Leersia perrieri LPERR10G05620 N
Lus10000332.g Linum usitatissimum Lus10000332.g N
Lus10001271.g Linum usitatissimum Lus10001271.g N
Lus10009475.g Linum usitatissimum Lus10009475.g N
Lus10010101.g Linum usitatissimum Lus10010101.g N
Lus10012603.g Linum usitatissimum Lus10012603.g N
Lus10015902.g Linum usitatissimum Lus10015902.g N
Lus10016680.g Linum usitatissimum Lus10016680.g N
Lus10029950.g Linum usitatissimum Lus10029950.g N
MDP0000267178 Malus domestica MDP0000267178 N
MDP0000646823 Malus domestica MDP0000646823 N
MDP0000672131 Malus domestica MDP0000672131 N
MDP0000944210 Malus domestica MDP0000944210 N
mgf015694m Mimulus guttatus mgf015694m N
MLOC_21759 Hordeum vulgare MLOC_21759 N
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N
MTR_3g099620 Medicago truncatula MTR_3g099620 N
MTR_5g064950 Medicago truncatula MTR_5g064950 N
MTR_7g113830 Medicago truncatula MTR_7g113830 N
MTR_8g066770 Medicago truncatula MTR_8g066770 N
OB02G40170 Oryza brachyantha OB02G40170 N
OB03G16590 Oryza brachyantha OB03G16590 N
OB08G25610 Oryza brachyantha OB08G25610 N
OB09G19960 Oryza brachyantha OB09G19960 N
OB10G16200 Oryza brachyantha OB10G16200 N
OBART02G33270 Oryza barthii OBART02G33270 N
OBART08G18480 Oryza barthii OBART08G18480 N
OBART10G08120 Oryza barthii OBART10G08120 N
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N
OGLUM08G19420 Oryza glumaepatula OGLUM08G19420 N
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N
OMERI02G31750 Oryza meridionalis OMERI02G31750 N
OMERI08G14480 Oryza meridionalis OMERI08G14480 N
OMERI09G10430 Oryza meridionalis OMERI09G10430 N
ONIVA02G35790 Oryza nivara ONIVA02G35790 N
ONIVA08G20580 Oryza nivara ONIVA08G20580 N
ONIVA09G13890 Oryza nivara ONIVA09G13890 N
ONIVA10G07810 Oryza nivara ONIVA10G07810 N
OPUNC02G30580 Oryza punctata OPUNC02G30580 N
OPUNC03G06240 Oryza punctata OPUNC03G06240 N
OPUNC08G16410 Oryza punctata OPUNC08G16410 N
OPUNC09G11790 Oryza punctata OPUNC09G11790 N
OPUNC10G07050 Oryza punctata OPUNC10G07050 N
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N
orange1.1g043618m.g Citrus sinensis orange1.1g043618m.g N
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N
ORGLA08G0160400 Oryza glaberrima ORGLA08G0160400 N
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N
ORUFI08G20670 Oryza rufipogon ORUFI08G20670 N
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N
OS08G0483900 Oryza sativa OS08G0483900 N
OS09G0468700 Oryza sativa OS09G0468700 N
OS10G0376900 Oryza sativa OS10G0376900 N
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N
Pavir.J22933 Panicum virgatum Pavir.J22933 N
Pavir.J40759 Panicum virgatum Pavir.J40759 N
PGSC0003DMG400002125 Solanum tuberosum PGSC0003DMG400002125 N
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N
PK04856.1 Cannabis sativa PK04856.1 N
PK14736.1 Cannabis sativa PK14736.1 N
PK18533.1 Cannabis sativa PK18533.1 N
PK21294.1 Cannabis sativa PK21294.1 N
PK28391.1 Cannabis sativa PK28391.1 N
Pm003380 Prunus mume Pm003380 N
Pm004489 Prunus mume Pm004489 N
Pm009474 Prunus mume Pm009474 N
Pm023207 Prunus mume Pm023207 N
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N
POPTR_0003s09200 Populus trichocarpa POPTR_0003s09200 N
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N
Sb0012s004780 Sorghum bicolor Sb0012s004780 N
Sb01g044640 Sorghum bicolor Sb01g044640 N
Sb02g027210 Sorghum bicolor Sb02g027210 N
Sb04g027280 Sorghum bicolor Sb04g027280 N
FMA Arabidopsis lyrata scaffold_302925.1 N
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N
Si013925m.g Setaria italica Si013925m.g N
Si017701m.g Setaria italica Si017701m.g N
Si036568m.g Setaria italica Si036568m.g N
Si038653m.g Setaria italica Si038653m.g N
Solyc04g074810.2 Solanum lycopersicum Solyc04g074810.2 N
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N
TCM_005028 Theobroma cacao TCM_005028 N
TCM_015694 Theobroma cacao TCM_015694 N
TCM_020336 Theobroma cacao TCM_020336 N
TCM_026599 Theobroma cacao TCM_026599 N
TCM_034439 Theobroma cacao TCM_034439 N
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N
TRIUR3_09788 Triticum urartu TRIUR3_09788 N
FMA Vitis vinifera VIT_05s0029g00050 N
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N