17002_YLR228C (Saccharomyces bayanus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 17002_YLR228C T390787_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM22
M00096_2.00 		Saccharomyces cerevisiae
NNCSGRDNHN
NDNHYCSGNN		 PBM
Badis et al.(2008)
ECM22_2066 		0.654 0.975
ECM22
M00924_2.00 		Saccharomyces cerevisiae
NNDWACGRN
NYCGTWHNN		 PBM
Gordan et al.(2011)
Ecm22 		0.654 0.975
ECM22
M01589_2.00 		Saccharomyces cerevisiae
NNNCGGVN
NBCCGNNN		 PBM
Zhu et al.(2009)
Ecm22 		0.654 0.975
ECM22
M07522_2.00 		Saccharomyces cerevisiae
TCCGGAD
HTCCGGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0292.1 		0.654 0.975
ECM22
M08679_2.00 		Saccharomyces cerevisiae
NNYCGGRNNDMCGGAVNH
DNBTCCGKHNNYCCGRNN		 Misc
DeBoer et al.(2011)
YLR228C_849 		0.654 0.975
UPC2
M00920_2.00 		Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN		 PBM
Gordan et al.(2011)
Upc2 		0.571 0.700
UPC2
M07508_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1 		0.571 0.700
UPC2
M08654_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 Misc
DeBoer et al.(2011)
YDR213W_544 		0.571 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17002_YLR228C Zinc cluster 41 80

Links

Other Zinc cluster family TFs
Other Saccharomyces bayanus TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012556 Calypte anna Aan_R012556 I 0.000
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.000
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.000
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.000
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.000
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.000
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.000
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.000
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.000
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.000
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.000
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.000
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.000
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.000
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.000
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.000
lcor Danio rerio ENSDARG00000100908 I 0.000
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.000
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.000
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.000
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.000
LCOR Homo sapiens ENSG00000196233 I 0.000
ENSGACG00000007469 Gasterosteus aculeatus ENSGACG00000007469 D 0.000
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.000
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.000
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.000
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.000
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.000
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.000
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.000
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.000
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.000
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.000
Lcor Mus musculus ENSMUSG00000025019 I 0.000
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.000
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.000
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.000
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.000
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.000
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.000
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.000
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.000
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.000
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.000
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.000
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.000
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.000
LCOR Pan troglodytes ENSPTRG00000002800 I 0.000
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.000
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.000
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.000
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.000
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.000
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.000
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.000
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.000
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.000
lcor Takifugu rubripes ENSTRUG00000006194 I 0.000
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.000
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.000
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.000
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.000
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.000
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.000
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.000
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.000
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.000
Tal_R010723 Tyto alba Tal_R010723 I 0.000
lcorl Xenopus tropicalis XB-GENE-995017 D 0.000