RAV2 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G68840 T000434_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV2
M01609_2.00		 Arabidopsis thaliana
RCAACATH
DATGTTGY		 PBM
Weirauch et al.(2014)
pTH8279		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.860 0.860
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.860 0.860
TEM1
M01605_2.00 		Arabidopsis thaliana
RCAACATW
WATGTTGY		 PBM
Weirauch et al.(2014)
pTH8264 		0.875 0.939
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.860 0.860
RAV1
M01645_2.00 		Arabidopsis thaliana
NNNNVDCABN
NVTGHBNNNN		 PBM
Weirauch et al.(2014)
pTH8249 		0.872 0.878
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.860 0.860
ARF14
M01647_2.00 		Arabidopsis thaliana
NNVACAKN
NMTGTBNN		 PBM
Weirauch et al.(2014)
pTH8296 		0.867 0.878
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.860 0.860
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.860 0.860
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.780 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01609_2.00 AP2 51 100

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G68840.1 AP2 63 112
AT1G68840.1 B3 188 293
AT1G68840.2 AP2 63 112

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLI2 Homo sapiens ENSG00000074047 D
GLI3 Homo sapiens ENSG00000106571 D
GLI1 Homo sapiens ENSG00000111087 D
Gli1 Mus musculus ENSMUSG00000025407 D
Gli2 Mus musculus ENSMUSG00000048402 D
GLI2 Anolis carolinensis ENSACAG00000004133 I
GLI1 Anolis carolinensis ENSACAG00000006541 I
GLI3 Anolis carolinensis ENSACAG00000017547 I
ENSAMEG00000004878 Ailuropoda melanoleuca ENSAMEG00000004878 I
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I
GLI1 Bos taurus ENSBTAG00000006631 I
GLI3 Bos taurus ENSBTAG00000010671 I
GLI2 Bos taurus ENSBTAG00000011682 I
GLI1 Canis familiaris ENSCAFG00000000223 I
GLI3 Canis familiaris ENSCAFG00000003535 I
GLI2 Canis familiaris ENSCAFG00000004821 I
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I
ENSCING00000012018 Ciona intestinalis ENSCING00000012018 I
GLI1 Callithrix jacchus ENSCJAG00000007324 I
GLI3 Callithrix jacchus ENSCJAG00000007690 I
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I
GLI1 Cavia porcellus ENSCPOG00000005414 I
GLI2 Cavia porcellus ENSCPOG00000015189 I
ENSCSAG00000004897 Chlorocebus sabaeus ENSCSAG00000004897 I
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I
ENSCSAVG00000009575 Ciona savignyi ENSCSAVG00000009575 I
gli2b Danio rerio ENSDARG00000020884 I
gli3 Danio rerio ENSDARG00000052131 I
gli1 Danio rerio ENSDARG00000101244 I
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I
GLI1 Dasypus novemcinctus ENSDNOG00000017512 I
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I
GLI3 Equus caballus ENSECAG00000009281 I
GLI1 Equus caballus ENSECAG00000011246 I
GLI3 Echinops telfairi ENSETEG00000003955 I
GLI1 Echinops telfairi ENSETEG00000006674 I
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I
GLI1 Felis catus ENSFCAG00000002081 I
GLI3 Felis catus ENSFCAG00000011989 I
GLI2 Felis catus ENSFCAG00000014531 I
ENSGACG00000004834 Gasterosteus aculeatus ENSGACG00000004834 I
GLI2 Gallus gallus ENSGALG00000011630 I
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I
GLI1 Gorilla gorilla ENSGGOG00000001974 I
GLI3 Gorilla gorilla ENSGGOG00000002026 I
GLI2 Gorilla gorilla ENSGGOG00000009653 I
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I
GLI3 Loxodonta africana ENSLAFG00000008944 I
GLI1 Loxodonta africana ENSLAFG00000022910 I
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I
ENSMEUG00000009702 Macropus eugenii ENSMEUG00000009702 I
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I
GLI2 Meleagris gallopavo ENSMGAG00000011872 I
GLI3 Meleagris gallopavo ENSMGAG00000012277 I
GLI3 Microcebus murinus ENSMICG00000010785 I
GLI1 Myotis lucifugus ENSMLUG00000001013 I
GLI3 Myotis lucifugus ENSMLUG00000015711 I
GLI2 Macaca mulatta ENSMMUG00000001868 I
GLI3 Macaca mulatta ENSMMUG00000013614 I
GLI1 Macaca mulatta ENSMMUG00000022058 I
GLI2 Monodelphis domestica ENSMODG00000000245 I
GLI3 Monodelphis domestica ENSMODG00000002714 I
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I
ENSMPUG00000001825 Mustela putorius furo ENSMPUG00000001825 I
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I
ENSNLEG00000017337 Nomascus leucogenys ENSNLEG00000017337 I
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I
ENSOARG00000006674 Ovis aries ENSOARG00000006674 I
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I
GLI1 Oryctolagus cuniculus ENSOCUG00000011128 I
GLI1 Otolemur garnettii ENSOGAG00000005219 I
GLI3 Otolemur garnettii ENSOGAG00000012651 I
GLI2 Otolemur garnettii ENSOGAG00000032438 I
ENSONIG00000006298 Oreochromis niloticus ENSONIG00000006298 I
GLI1 Ochotona princeps ENSOPRG00000006483 I
GLI3 Ochotona princeps ENSOPRG00000011225 I
gli2b Oryzias latipes ENSORLG00000012490 I
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I
ENSPANG00000017044 Papio anubis ENSPANG00000017044 I
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I
GLI2 Procavia capensis ENSPCAG00000001704 I
GLI3 Procavia capensis ENSPCAG00000015092 I
GLI1 Procavia capensis ENSPCAG00000015756 I
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I
ENSPFOG00000019294 Poecilia formosa ENSPFOG00000019294 I
ENSPPYG00000004689 Pongo abelii ENSPPYG00000004689 I
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I
GLI1 Pan troglodytes ENSPTRG00000005133 I
GLI2 Pan troglodytes ENSPTRG00000012413 I
GLI3 Pan troglodytes ENSPTRG00000019117 I
GLI1 Pteropus vampyrus ENSPVAG00000012109 I
GLI3 Pteropus vampyrus ENSPVAG00000015920 I
Gli2 Rattus norvegicus ENSRNOG00000007261 I
Gli1 Rattus norvegicus ENSRNOG00000025120 I
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I
ENSSHAG00000006652 Sarcophilus harrisii ENSSHAG00000006652 I
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I
GLI2 Sus scrofa ENSSSCG00000015733 I
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I
ENSSTOG00000020366 Ictidomys tridecemlineatus ENSSTOG00000020366 I
GLI3 Tupaia belangeri ENSTBEG00000006673 I
GLI2 Taeniopygia guttata ENSTGUG00000004599 I
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I
gli2b Tetraodon nigroviridis ENSTNIG00000013668 I
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I
gli2b Takifugu rubripes ENSTRUG00000007692 I
gli2b Takifugu rubripes ENSTRUG00000010444 I
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I
GLI2 Tursiops truncatus ENSTTRG00000002058 I
GLI3 Tursiops truncatus ENSTTRG00000003628 I
GLI1 Tursiops truncatus ENSTTRG00000013086 I
ENSXMAG00000001777 Xiphophorus maculatus ENSXMAG00000001777 I
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I
HelroG111329 Helobdella robusta HelroG111329 I
Aan_R003640 Calypte anna Aan_R003640 I
Aan_R014715 Calypte anna Aan_R014715 I
Afo_R006826 Aptenodytes forsteri Afo_R006826 I
Afo_R007816 Aptenodytes forsteri Afo_R007816 I
Brh_R008256 Buceros rhinoceros Brh_R008256 I
Brh_R010932 Buceros rhinoceros Brh_R010932 I
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I
ENSBTAP00000008704-D1 Bos grunniens ENSBTAP00000008704-D1 I
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I
ENSP00000228682 Macaca fascicularis ENSP00000228682 I
ENSP00000379258 Macaca fascicularis ENSP00000379258 I
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I
Gfo_R001212 Geospiza fortis Gfo_R001212 I
Gfo_R007869 Geospiza fortis Gfo_R007869 I
Gfo_R013682 Geospiza fortis Gfo_R013682 I
Myotis_brandtii_GLI1_10018379 Myotis brandtii Myotis_brandtii_GLI1_10018379 I
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I
Ogr02489 Ophisaurus gracilis Ogr02489 I
Pvit_05813 Pogona vitticeps Pvit_05813 I
Pvit_06470 Pogona vitticeps Pvit_06470 I
Pvit_19093 Pogona vitticeps Pvit_19093 I
Tal_R006208 Tyto alba Tal_R006208 I
Tal_R009020 Tyto alba Tal_R009020 I
gli3.L Xenopus laevis XB-GENE-865509 I
XP_002933449 Xenopus tropicalis XP_002933449 I
XP_002933450 Xenopus tropicalis XP_002933450 I