BRADI1G48320 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI1G48320 T001271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.768 0.880
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.768 0.880
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.763 0.880
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.763 0.880
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.762 0.880
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.762 0.840
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.762 0.840
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.752 0.860
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.752 0.860
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.752 0.860
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.752 0.860
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.716 0.820
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.716 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G48320.1 AP2 42 93

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm007242 Prunus mume Pm007242 N
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N
MDP0000716430 Malus domestica MDP0000716430 N
MDP0000184998 Malus domestica MDP0000184998 N
Gorai.N001000 Gossypium raimondii Gorai.N001000 N
Carubv10014434m.g Capsella rubella Carubv10014434m.g N
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N
30005.m001261 Ricinus communis 30005.m001261 N
AT3G07565 Arabidopsis thaliana AT3G07565 N
TCM_002550 Theobroma cacao TCM_002550 N
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N
Bra040015 Brassica rapa Bra040015 N
Bra029658 Brassica rapa Bra029658 N
Bra001258 Brassica rapa Bra001258 N
Bo3g061340 Brassica oleracea Bo3g061340 N
Bo1g147290 Brassica oleracea Bo1g147290 N