GLYMA06G29110 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA06G29110 T001814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.802 0.902
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.748 0.824
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.748 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G29110.2 AP2 5 56

Links

Other AP2 family TFs
Other Glycine max TFs

299 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G01818 Arabidopsis thaliana AT2G01818 D
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I
PK02661.1 Cannabis sativa PK02661.1 I
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I
MDP0000290118 Malus domestica MDP0000290118 I
Lus10030763.g Linum usitatissimum Lus10030763.g I
Lus10013242.g Linum usitatissimum Lus10013242.g I
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I
Carubv10017978m.g Capsella rubella Carubv10017978m.g I
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I
Bo2g134600 Brassica oleracea Bo2g134600 I
cassava20325.m1 Manihot esculenta cassava20325.m1 I
Bo7g078820 Brassica oleracea Bo7g078820 I
29968.m000644 Ricinus communis 29968.m000644 I
Pm005894 Prunus mume Pm005894 I
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I
TCM_011266 Theobroma cacao TCM_011266 I
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I
Lus10003680.g Linum usitatissimum Lus10003680.g N
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N
Lus10028998.g Linum usitatissimum Lus10028998.g N
Solyc04g008090.2 Solanum lycopersicum Solyc04g008090.2 N
Cucsa.012070 Cucumis sativus Cucsa.012070 N
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N
Cla005897 Citrullus lanatus Cla005897 N
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N
cassava40347.m1 Manihot esculenta cassava40347.m1 N