OLONG_005458 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_005458 T003340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.852 0.961
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.852 0.961
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.722 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_005458-R1 AP2 54 105

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG101804 Capitella teleta CapteG101804 N
CGI_10024692 Crassostrea gigas CGI_10024692 N
HelroG67484 Helobdella robusta HelroG67484 N
HelroG79060 Helobdella robusta HelroG79060 N
LotgiG77665 Lottia gigantea LotgiG77665 N
SMU15028438 Schmidtea mediterranea SMU15028438 N
ECANG7_00830 Echinococcus canadensis ECANG7_00830 N
EmuJ_000240200 Echinococcus multilocularis EmuJ_000240200 N
TASK_0000695601 Taenia asiatica TASK_0000695601 N