ONIVA03G06360 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA03G06360 T003572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.839 0.940
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.839 0.940
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.832 0.920
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.697 0.820
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.697 0.820
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.683 0.660
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.681 0.820
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.681 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA03G06360.1 AP2 111 162

Links

Other AP2 family TFs
Other Oryza nivara TFs

454 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC010 Arabidopsis thaliana AT1G28470 D 0.000
anac075 Arabidopsis thaliana AT4G29230 D 0.000
PK27085.1 Cannabis sativa PK27085.1 D 0.000
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.000
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.000
BGIOSGA001044 Oryza indica BGIOSGA001044 I 0.000
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.000
BGIOSGA020356 Oryza indica BGIOSGA020356 I 0.000
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.000
Bo1g016630 Brassica oleracea Bo1g016630 I 0.000
Bo5g055990 Brassica oleracea Bo5g055990 I 0.000
Bo7g047040 Brassica oleracea Bo7g047040 I 0.000
Bo7g113660 Brassica oleracea Bo7g113660 I 0.000
Bra011090 Brassica rapa Bra011090 I 0.000
Bra024152 Brassica rapa Bra024152 I 0.000
Bra024733 Brassica rapa Bra024733 I 0.000
Bra032910 Brassica rapa Bra032910 I 0.000
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.000
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.000
BRADI2G46197 Brachypodium distachyon BRADI2G46197 I 0.000
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.000
F775_07141 Aegilops tauschii F775_07141 I 0.000
F775_07518 Aegilops tauschii F775_07518 I 0.000
F775_16052 Aegilops tauschii F775_16052 I 0.000
F775_30638 Aegilops tauschii F775_30638 I 0.000
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.000
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.000
GLYMA05G09110 Glycine max GLYMA05G09110 I 0.000
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.000
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.000
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.000
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.000
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.000
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.000
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.000
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.000
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.000
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.000
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.000
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.000
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.000
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.000
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.000
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.000
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.000
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.000
GSMUA_Achr6G27000_001 Musa acuminata GSMUA_Achr6G27000_001 I 0.000
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.000
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.000
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.000
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.000
LPERR05G21400 Leersia perrieri LPERR05G21400 I 0.000
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.000
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.000
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.000
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.000
OB01G15780 Oryza brachyantha OB01G15780 I 0.000
OB05G33280 Oryza brachyantha OB05G33280 I 0.000
OB06G19430 Oryza brachyantha OB06G19430 I 0.000
OBART01G05840 Oryza barthii OBART01G05840 I 0.000
OBART05G25770 Oryza barthii OBART05G25770 I 0.000
OBART06G10240 Oryza barthii OBART06G10240 I 0.000
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.000
OGLUM01G29870 Oryza glumaepatula OGLUM01G29870 I 0.000
OGLUM05G27400 Oryza glumaepatula OGLUM05G27400 I 0.000
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.000
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.000
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.000
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.000
OLONG_018487 Oryza longistaminata OLONG_018487 I 0.000
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.000
OMERI02G35510 Oryza meridionalis OMERI02G35510 I 0.000
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.000
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.000
ONIVA01G29490 Oryza nivara ONIVA01G29490 I 0.000
ONIVA05G27670 Oryza nivara ONIVA05G27670 I 0.000
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.000
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.000
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.000
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.000
OPUNC05G23360 Oryza punctata OPUNC05G23360 I 0.000
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.000
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.000
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.000
ORGLA05G0222500 Oryza glaberrima ORGLA05G0222500 I 0.000
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.000
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.000
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.000
ORUFI05G27670 Oryza rufipogon ORUFI05G27670 I 0.000
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.000
OS01G0191300 Oryza sativa OS01G0191300 I 0.000
OS05G0563000 Oryza sativa OS05G0563000 I 0.000
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.000
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.000
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.000
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.000
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.000
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.000
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.000
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.000
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.000
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.000
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.000
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.000
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.000
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.000
Sb09g006015 Sorghum bicolor Sb09g006015 I 0.000
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.000
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.000
Si001527m.g Setaria italica Si001527m.g I 0.000
Si002301m.g Setaria italica Si002301m.g I 0.000
Si006639m.g Setaria italica Si006639m.g I 0.000
Si017393m.g Setaria italica Si017393m.g I 0.000
Si019444m.g Setaria italica Si019444m.g I 0.000
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.000
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.000
TCM_016984 Theobroma cacao TCM_016984 I 0.000
TCM_029798 Theobroma cacao TCM_029798 I 0.000
TCM_037747 Theobroma cacao TCM_037747 I 0.000
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.000
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.000
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.000
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.000
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.000
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.000
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.000
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.000
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.000
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.000
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.000
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.000
Ca_02457 Cicer arietinum Ca_02457 I 0.000
Ca_06348 Cicer arietinum Ca_06348 I 0.000
Ca_11273 Cicer arietinum Ca_11273 I 0.000
Cla011431 Citrullus lanatus Cla011431 I 0.000
Pm010104 Prunus mume Pm010104 I 0.000
Pm015625 Prunus mume Pm015625 I 0.000
Pm027280 Prunus mume Pm027280 I 0.000
29912.m005354 Ricinus communis 29912.m005354 I 0.000
29917.m002016 Ricinus communis 29917.m002016 I 0.000
30190.m010767 Ricinus communis 30190.m010767 I 0.000
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.000
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.000
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.000
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.000
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.000
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.000
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.000
mgf012882m Mimulus guttatus mgf012882m I 0.000
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.000
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.000
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.000
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.000
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.000
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.000
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.000
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.000
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.000
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.000
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.000
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.000
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.000
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.000
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.000
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.000
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.000
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.000
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.000
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.000
MDP0000124509 Malus domestica MDP0000124509 I 0.000
MDP0000276278 Malus domestica MDP0000276278 I 0.000
MDP0000309351 Malus domestica MDP0000309351 I 0.000
MDP0000663564 Malus domestica MDP0000663564 I 0.000
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.000
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.000
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.000
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.000
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.000
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.000
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I 0.000
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I 0.000
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I 0.000
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.000
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.000
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.000
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.000
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.000
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.000
PK28347.1 Cannabis sativa PK28347.1 I 0.000
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.000
GRMZM2G450445 Zea mays GRMZM2G450445 N 0.000
Si012740m.g Setaria italica Si012740m.g N 0.000