CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava21723.m1
(
Manihot esculenta
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
cassava21723.m1
T006850_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava21723.m1
AP2
34
85
PVYRGVRRRSSGKWVSEIREPRRPNRIWLGTFPTPEMAAVAYDVAALALKGK
Links
Other
AP2
family TFs
Other
Manihot esculenta
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.310210
Cucumis sativus
Cucsa.310210
N
PK17289.1
Cannabis sativa
PK17289.1
N
PK03582.1
Cannabis sativa
PK03582.1
N
SapurV1A.0344s0260
Salix purpurea
SapurV1A.0344s0260
N
MDP0000190656
Malus domestica
MDP0000190656
N
Gorai.010G116000
Gossypium raimondii
Gorai.010G116000
N
Gorai.009G127000
Gossypium raimondii
Gorai.009G127000
N
gene11611-v1.0-hybrid
Fragaria vesca
gene11611-v1.0-hybrid
N
mgf003540m
Mimulus guttatus
mgf003540m
N
GLYMA15G00440
Glycine max
GLYMA15G00440
N
cassava11133.m1
Manihot esculenta
cassava11133.m1
N
Pm004638
Prunus mume
Pm004638
N
TCM_036972
Theobroma cacao
TCM_036972
N
PRUPE_ppa002486mg
Prunus persica
PRUPE_ppa002486mg
N
PRUPE_ppa002480mg
Prunus persica
PRUPE_ppa002480mg
N
POPTR_0006s27240
Populus trichocarpa
POPTR_0006s27240
N
POPTR_0001s20880
Populus trichocarpa
POPTR_0001s20880
N
GLYMA20G02970
Glycine max
GLYMA20G02970
N