CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
mgf007881m
(
Mimulus guttatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
mgf007881m
T007344_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.724
0.898
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf007881m
AP2
81
132
CNYRGVRQRTWGKWVSEIREPHRGGRLWLGTFGTGFEAALAYDEAARIMYGP
Links
Other
AP2
family TFs
Other
Mimulus guttatus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_7DS_C57224E6E
Triticum aestivum
Traes_7DS_C57224E6E
N
0.000
Sb03g026620
Sorghum bicolor
Sb03g026620
N
0.000
Sb06g028730
Sorghum bicolor
Sb06g028730
N
0.000
Sb07g006170
Sorghum bicolor
Sb07g006170
N
0.000
Si014404m.g
Setaria italica
Si014404m.g
N
0.000
Traes_4AL_1D254E0E4
Triticum aestivum
Traes_4AL_1D254E0E4
N
0.000
Traes_7AS_A4B5D1816
Triticum aestivum
Traes_7AS_A4B5D1816
N
0.000
Traes_7BS_9D1E05CB7
Triticum aestivum
Traes_7BS_9D1E05CB7
N
0.000
Traes_7DS_A234A13E1
Triticum aestivum
Traes_7DS_A234A13E1
N
0.000
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.000
TRIUR3_03303
Triticum urartu
TRIUR3_03303
N
0.000
Pm005256
Prunus mume
Pm005256
N
0.000
mgf008645m
Mimulus guttatus
mgf008645m
N
0.000
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.000
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.000
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.000
Pavir.Fb00845
Panicum virgatum
Pavir.Fb00845
N
0.000
Pavir.J28012
Panicum virgatum
Pavir.J28012
N
0.000
MTR_3g101520
Medicago truncatula
MTR_3g101520
N
0.000
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.000
Bra035129
Brassica rapa
Bra035129
N
0.000
F775_06135
Aegilops tauschii
F775_06135
N
0.000
F775_07987
Aegilops tauschii
F775_07987
N
0.000
GRMZM2G106673
Zea mays
GRMZM2G106673
N
0.000
GRMZM2G173321
Zea mays
GRMZM2G173321
N
0.000
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
0.000
MLOC_76431
Hordeum vulgare
MLOC_76431
N
0.000
BGIOSGA022464
Oryza indica
BGIOSGA022464
N
0.000
OB06G15600
Oryza brachyantha
OB06G15600
N
0.000
OGLUM06G06330
Oryza glumaepatula
OGLUM06G06330
N
0.000
OLONG_013315
Oryza longistaminata
OLONG_013315
N
0.000
OMERI06G07230
Oryza meridionalis
OMERI06G07230
N
0.000
ONIVA06G07020
Oryza nivara
ONIVA06G07020
N
0.000
ORGLA06G0055700
Oryza glaberrima
ORGLA06G0055700
N
0.000
ORUFI06G06290
Oryza rufipogon
ORUFI06G06290
N
0.000
OS06G0194400
Oryza sativa
OS06G0194400
N
0.000