gene26463-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene26463-v1.0-hybrid T008435_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.815 0.980
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.765 0.900
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.685 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.681 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna26463.1-v1.0-hybrid AP2 28 79

Links

Other AP2 family TFs
Other Fragaria vesca TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA15G04200 Glycine max GLYMA15G04200 I 0.000
OBART02G37370 Oryza barthii OBART02G37370 I 0.000
PGSC0003DMG400023432 Solanum tuberosum PGSC0003DMG400023432 I 0.000
Si034524m.g Setaria italica Si034524m.g I 0.000
GLYMA13G41210 Glycine max GLYMA13G41210 I 0.000
Gorai.003G130700 Gossypium raimondii Gorai.003G130700 I 0.000
Gorai.006G172000 Gossypium raimondii Gorai.006G172000 I 0.000
Gorai.009G098300 Gossypium raimondii Gorai.009G098300 I 0.000
Thhalv10012893m.g Eutrema salsugineum Thhalv10012893m.g I 0.000
SapurV1A.0041s0150 Salix purpurea SapurV1A.0041s0150 I 0.000
SapurV1A.0040s0420 Salix purpurea SapurV1A.0040s0420 I 0.000
PDK_20s1590481g002 Phoenix dactylifera PDK_20s1590481g002 N 0.000
PDK_20s1300944g001 Phoenix dactylifera PDK_20s1300944g001 N 0.000
MDP0000222004 Malus domestica MDP0000222004 N 0.000
MDP0000138764 Malus domestica MDP0000138764 N 0.000
MDP0000119092 Malus domestica MDP0000119092 N 0.000
Lus10016527.g Linum usitatissimum Lus10016527.g N 0.000
Traes_3DL_FCD561E40 Triticum aestivum Traes_3DL_FCD561E40 N 0.000