MDP0000122740 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000122740 T008951_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.704 0.740
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.704 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000122740 AP2 13 64

Links

Other AP2 family TFs
Other Malus domestica TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g009300 Brassica oleracea Bo2g009300 I
Bra028640 Brassica rapa Bra028640 I
NAC082 Arabidopsis thaliana AT5G09330 N
Bo3g005150 Brassica oleracea Bo3g005150 N
Bo9g174090 Brassica oleracea Bo9g174090 N
Bra009379 Brassica rapa Bra009379 N
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N
Carubv10001139m.g Capsella rubella Carubv10001139m.g N
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N