CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10018877m.g
(
Eutrema salsugineum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Thhalv10018877m.g
T009958_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10018877m
AP2
53
108
SSYRGVTRWTGRYEAHLWDKNCWNETQTKKGRQGAYDEEEAAARAYDLAALKYWGR
Thhalv10018877m
AP2
150
202
SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAARAYDIAAIEYRGL
Links
Other
AP2
family TFs
Other
Eutrema salsugineum
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Otx2
Mus musculus
ENSMUSG00000021848
D
OTX2
Myotis lucifugus
ENSMLUG00000022591
I
HMEL015659
Heliconius melpomene
HMEL015659
I
unc-30
Caenorhabditis elegans
WBGene00006766
I
pitx1
Gasterosteus aculeatus
ENSGACG00000016483
I
Cmyd_10017639
Chelonia mydas
Cmyd_10017639
I
Hsal_07660--XP_394161.1_APIME
Harpegnathos saltator
Hsal_07660--XP_394161.1_APIME
I
Ocbimv22035611m.g
Octopus bimaculoides
Ocbimv22035611m.g
I
TPRX1
Homo sapiens
ENSG00000178928
I
OTX2
Choloepus hoffmanni
ENSCHOG00000013827
I
ENSCSAG00000014537
Chlorocebus sabaeus
ENSCSAG00000014537
I
CLEC006124
Cimex lectularius
CLEC006124
N
Sjc_0128760
Schistosoma japonicum
Sjc_0128760
N
LDEC023625
Leptinotarsa decemlineata
LDEC023625
N
LDEC016519
Leptinotarsa decemlineata
LDEC016519
N
AALB006874
Anopheles albimanus
AALB006874
N
Alligator_sinensis_CCG004399.1
Alligator sinensis
Alligator_sinensis_CCG004399.1
N
YQE_12574
Dendroctonus ponderosae
YQE_12574
N
Traes_3AS_348CA06D5
Triticum aestivum
Traes_3AS_348CA06D5
N
XP_002164986.1
Hydra magnipapillata
XP_002164986.1
N
GK22279
Drosophila willistoni
FBgn0224264
N
AEPI010431
Anopheles epiroticus
AEPI010431
N
ASIS015315
Anopheles sinensis
ASIS015315
N
ANCCAN_27245
Ancylostoma caninum
ANCCAN_27245
N
ANCCEY_04348
Ancylostoma ceylanicum
ANCCEY_04348
N
ANCCEY_11895
Ancylostoma ceylanicum
ANCCEY_11895
N
Hba_17538
Heterorhabditis bacteriophora
Hba_17538
N
OESDEN_16215
Oesophagostomum dentatum
OESDEN_16215
N
SMTD_0001972301
Schistosoma mattheei
SMTD_0001972301
N
snap_masked-nMf.1.1.scaf16485-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf16485-processed-gene-0.2
N
snap_masked-nMf.1.1.scaf19847-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf19847-processed-gene-0.1
N
TELCIR_18721
Teladorsagia circumcincta
TELCIR_18721
N
TTRE_0000079401
Trichuris trichiura
TTRE_0000079401
N
LEUTX
Homo sapiens
ENSG00000213921
N
WUBG_02624
Wuchereria bancrofti
WUBG_02624
N
ACEP26305
Atta cephalotes
ACEP26305
N
CBG15039
Caenorhabditis briggsae
CBG15039
N
CGI_10007832
Crassostrea gigas
CGI_10007832
N
CJA11256
Caenorhabditis japonica
CJA11256
N
EFV55958
Trichinella spiralis
EFV55958
N
LEUTX
Bos taurus
ENSBTAG00000046425
N
LEUTX
Canis familiaris
ENSCAFG00000028552
N
DPRX
Choloepus hoffmanni
ENSCHOG00000010851
N
ENSCJAG00000011381
Callithrix jacchus
ENSCJAG00000011381
N
ENSCSAG00000003788
Chlorocebus sabaeus
ENSCSAG00000003788
N
LEUTX
Felis catus
ENSFCAG00000023272
N
NEMVEDRAFT_v1g48861
Nematostella vectensis
NEMVEDRAFT_v1g48861
N
ENSLAFG00000000420
Loxodonta africana
ENSLAFG00000000420
N
DMBX1
Monodelphis domestica
ENSMODG00000001963
N
ENSOARG00000006291
Ovis aries
ENSOARG00000006291
N
ENSPANG00000010570
Papio anubis
ENSPANG00000010570
N
LEUTX
Pan troglodytes
ENSPTRG00000033892
N
ENSPVAG00000005359
Pteropus vampyrus
ENSPVAG00000005359
N
ENSSSCG00000002985
Sus scrofa
ENSSSCG00000002985
N
ENSSTOG00000026735
Ictidomys tridecemlineatus
ENSSTOG00000026735
N
ENSTTRG00000007283
Tursiops truncatus
ENSTTRG00000007283
N
WUBG_02192
Wuchereria bancrofti
WUBG_02192
N
GB50469
Apis mellifera
GB50469
N
ISCW006446
Ixodes scapularis
ISCW006446
N