estExt_fgenesh1_pg.C_chr_3.10654 (Pichia stipitis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_fgenesh1_pg.C_chr_3.10654 T013908_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOK2
M00007_2.00 		Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN		 PBM
Badis et al.(2008)
SOK2_4560 		0.707 0.805
SOK2
M07438_2.00 		Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1 		0.707 0.805
SOK2
M08477_2.00 		Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND		 Misc
DeBoer et al.(2011)
YMR016C_404 		0.707 0.805
PHD1
M00006_2.00 		Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC		 PBM
Badis et al.(2008)
PHD1_4559 		0.687 0.793
PHD1
M01516_2.00 		Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN		 PBM
Zhu et al.(2009)
Phd1 		0.687 0.793
PHD1
M07437_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1 		0.687 0.793
PHD1
M07547_2.00 		Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB		 ChIP-exo
Rhee et al.(2011)
Phd1_1 		0.687 0.793
PHD1
M07548_2.00 		Saccharomyces cerevisiae
MYGCRC
GYGCRK		 ChIP-exo
Rhee et al.(2011)
Phd1_2 		0.687 0.793
PHD1
M07549_2.00 		Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA		 ChIP-exo
Rhee et al.(2011)
Phd1_3 		0.687 0.793
PHD1
M08475_2.00 		Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS		 Misc
DeBoer et al.(2011)
YKL043W_393 		0.687 0.793
PHD1
M08476_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 Misc
DeBoer et al.(2011)
YKL043W_554 		0.687 0.793
HCAG_07413
M01651_2.00 		Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN		 PBM
Weirauch et al.(2014)
pTH9346 		0.669 0.759
e_gw1.5.76.1
M01652_2.00 		Nectria haematococca
NNVTGCABNN
NNVTGCABNN		 PBM
Weirauch et al.(2014)
pTH9267 		0.655 0.724
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_3.10654 APSES 187 278

Links

Other APSES family TFs
Other Pichia stipitis TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_09147 Aspergillus nidulans CADANIAG00009460 D
NCU02525 Neurospora crassa NCU02525 D
MCYG_05698 Microsporum canis MCYG_05698 I
A1O1_07066 Capronia coronata A1O1_07066 I
A1O3_04293 Capronia epimyces A1O3_04293 I
A1O5_10209 Cladophialophora psammophila A1O5_10209 I
A1O7_01995 Cladophialophora yegresii A1O7_01995 I
A1O9_06812 Exophiala aquamarina A1O9_06812 I
ACRE_069740 Acremonium chrysogenum ACRE_069740 I
AOL_s00080g72 Arthrobotrys oligospora AOL_s00080g72 I
BBA_00162 Beauveria bassiana BBA_00162 I
Bcin01g03660 Botrytis cinerea Bcin01g03660 I
BDDG_08006 Blastomyces dermatitidis BDDG_08006 I
BGHDH14_bgh02635 Blumeria graminis BGHDH14_bgh02635 I
ACLA_065940 Aspergillus clavatus CADACLAG00006177 I
CADAFLAG00008497 Aspergillus flavus CADAFLAG00008497 I
AFUA_7G01640 Aspergillus fumigatus CADAFUAG00001034 I
CADANGAG00009556 Aspergillus niger CADANGAG00009556 I
CADAORAG00009290 Aspergillus oryzae CADAORAG00009290 I
ATEG_01777 Aspergillus terreus CADATEAG00002011 I
NFIA_114330 Neosartorya fischeri CADNFIAG00010501 I
CCM_06160 Cordyceps militaris CCM_06160 I
CFIO01_04983 Colletotrichum fioriniae CFIO01_04983 I
CGGC5_3739 Colletotrichum gloeosporioides CGGC5_3739 I
CH063_00417 Colletotrichum higginsianum CH063_00417 I
Cob_03535 Colletotrichum orbiculare Cob_03535 I
CPUR_03350 Claviceps purpurea CPUR_03350 I
CSUB01_05333 Colletotrichum sublineola CSUB01_05333 I
DRE_01510 Drechslerella stenobrocha DRE_01510 I
EPUS_02832 Endocarpon pusillum EPUS_02832 I
EURHEDRAFT_501316 Aspergillus ruber EURHEDRAFT_501316 I
EV44_g6209 Erysiphe necator EV44_g6209 I
FFUJ_01255 Fusarium fujikuroi FFUJ_01255 I
FGRRES_11891 Fusarium graminearum FGRRES_11891 I
FOXG_00317 Fusarium oxysporum FOXG_00317 I
FPSE_10383 Fusarium pseudograminearum FPSE_10383 I
FVEG_01203 Fusarium verticillioides FVEG_01203 I
G647_09808 Cladophialophora carrionii G647_09808 I
GGTG_05807 Gaeumannomyces graminis GGTG_05807 I
GLRG_10436 Colletotrichum graminicola GLRG_10436 I
H072_3502 Dactylellina haptotyla H072_3502 I
HCBG_00378 Histoplasma capsulatum HCBG_00378 I
HMPREF1120_04521 Exophiala dermatitidis HMPREF1120_04521 I
MAC_04246 Metarhizium acridum MAC_04246 I
MAJ_02199 Metarhizium majus MAJ_02199 I
MANI_113348 Metarhizium anisopliae MANI_113348 I
MAPG_04106 Magnaporthe poae MAPG_04106 I
MBM_09965 Marssonina brunnea MBM_09965 I
MBR_03676 Metarhizium brunneum MBR_03676 I
MCYG_05698 Arthroderma otae MCYG_05698 I
MGU_04868 Metarhizium guizhouense MGU_04868 I
NechaG31076 Fusarium solani NechaG31076 I
NEUTE1DRAFT_126529 Neurospora tetrasperma NEUTE1DRAFT_126529 I
OIDMADRAFT_102454 Oidiodendron maius OIDMADRAFT_102454 I
PAAG_06829 Paracoccidioides sp lutzii PAAG_06829 I
PABG_01108 Paracoccidioides brasiliensis PABG_01108 I
PCH_Pc21g13370 Penicillium rubens PCH_Pc21g13370 I
PDIP_55580 Penicillium digitatum PDIP_55580 I
PEX1_051400 Penicillium expansum PEX1_051400 I
PFICI_01259 Pestalotiopsis fici PFICI_01259 I
PITC_042790 Penicillium italicum PITC_042790 I
PODANS_1_8530 Podospora anserina PODANS_1_8530 I
PV04_02180 Capronia semiimmersa PV04_02180 I
PV05_07615 Exophiala xenobiotica PV05_07615 I
PV06_07810 Exophiala oligosperma PV06_07810 I
PV07_02470 Cladophialophora immunda PV07_02470 I
PV08_03320 Exophiala spinifera PV08_03320 I
PV10_03650 Exophiala mesophila PV10_03650 I
PV11_03661 Exophiala sideris PV11_03661 I
PVAR5_4882 Byssochlamys spectabilis PVAR5_4882 I
SBOR_7232 Sclerotinia borealis SBOR_7232 I
SMAC_05948 Sordaria macrospora SMAC_05948 I
SS1G_04244 Sclerotinia sclerotiorum SS1G_04244 I
TRIREDRAFT_45689 Trichoderma reesei TRIREDRAFT_45689 I
TRIVIDRAFT_112137 Trichoderma virens TRIVIDRAFT_112137 I
U727_00430320131 Penicillium solitum U727_00430320131 I
UCRPA7_119 Togninia minima UCRPA7_119 I
UREG_01680 Uncinocarpus reesii UREG_01680 I
UV8b_2370 Ustilaginoidea virens UV8b_2370 I
X797_003792 Metarhizium robertsii X797_003792 I
Z517_00073 Fonsecaea pedrosoi Z517_00073 I
Z518_02716 Rhinocladiella mackenziei Z518_02716 I
Z519_10875 Cladophialophora bantiana Z519_10875 I
e_gw1.1.1220.1 Nectria haematococca e_gw1.1.1220.1 I
estExt_fgenesh2_pg.C_20565 Neurospora discreta estExt_fgenesh2_pg.C_20565 I
e_gw1.00868.17.1 Aspergillus carbonarius e_gw1.00868.17.1 I
estExt_fgenesh1_pg.C_60443 Cryphonectria parasitica estExt_fgenesh1_pg.C_60443 I
Pc21g13370 Penicillium chrysogenum Pc21g13370 I
CIMG_04457 Coccidioides immitis CIMG_04457 N
ARB_00247 Arthroderma benhamiae ARB_00247 N
CPC735_073040 Coccidioides posadasii CPC735_073040 N
H101_00947 Trichophyton interdigitale H101_00947 N
H102_02117 Trichophyton rubrum H102_02117 N
H105_02133 Trichophyton soudanense H105_02133 N
MGYG_02793 Microsporum gypseum MGYG_02793 N
PMAA_016120 Talaromyces marneffei PMAA_016120 N
S40285_01892 Stachybotrys chlorohalonata S40285_01892 N
S40288_08474 Stachybotrys chartarum S40288_08474 N
TEQG_00725 Trichophyton equinum TEQG_00725 N
TESG_04628 Trichophyton tonsurans TESG_04628 N
TRV_08034 Trichophyton verrucosum TRV_08034 N
TSTA_024030 Talaromyces stipitatus TSTA_024030 N
VHEMI06531 Torrubiella hemipterigena VHEMI06531 N
PMAA_016120 Penicillium marneffei PMAA_016120 N