ACYPI34394 (Acyrthosiphon pisum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ACYPI34394 T014112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.785 0.977
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.762 0.767
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.762 0.767
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.762 0.767
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.762 0.767
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.683 0.698
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.683 0.698
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.683 0.698
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.683 0.698
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.683 0.698
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.683 0.698
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.659 0.651
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.647 0.465
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.621 0.698
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.518 0.395
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.485 0.384
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI34394-PA ARID/BRIGHT 244 330

Links

Other ARID/BRIGHT family TFs
Other Acyrthosiphon pisum TFs

380 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TTHERM_00243900 Tetrahymena thermophila TTHERM_00243900 D 0.485
GSPATT00004674001 Paramecium tetraurelia GSPATT00004674001 D 0.518
ASIM_0000128901 Anisakis simplex ASIM_0000128901 I 0.583
Tal_R005505 Tyto alba Tal_R005505 I 0.583
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I 0.447
Sakowv30017861m.g Saccoglossus kowalevskii Sakowv30017861m.g I 0.467
estExt_fgenesh1_pg.C_10228 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10228 I 0.448
MDP0000198823 Malus domestica MDP0000198823 I 0.440
orange1.1g029808m.g Citrus sinensis orange1.1g029808m.g I 0.446
SapurV1A.0338s0260 Salix purpurea SapurV1A.0338s0260 I 0.475
CLEC012017 Cimex lectularius CLEC012017 I 0.436
Contig1044.0.g66 Oxytricha trifallax Contig1044.0.g66 I 0.518
GG.C169_S01_00460 Chlorella vulgaris GG.C169_S01_00460 I 0.448
BGLB000541 Biomphalaria glabrata BGLB000541 I 0.469
BGLB003500 Biomphalaria glabrata BGLB003500 I 0.553
Aqu1.213820 Amphimedon queenslandica Aqu1.213820 I 0.573
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 I 0.424
ECANG7_06547 Echinococcus canadensis ECANG7_06547 I 0.467
EmuJ_001157200 Echinococcus multilocularis EmuJ_001157200 I 0.467
HDID_0000342501 Hymenolepis diminuta HDID_0000342501 I 0.467
HmN_000451100 Hymenolepis microstoma HmN_000451100 I 0.467
HNAJ_0000082601 Hymenolepis nana HNAJ_0000082601 I 0.467
MCOS_0000539101 Mesocestoides corti MCOS_0000539101 I 0.467
MhA1_Contig163.frz3.gene26 Meloidogyne hapla MhA1_Contig163.frz3.gene26 I 0.424
nRc.2.0.1.g09267 Romanomermis culicivorax nRc.2.0.1.g09267 I 0.485
SPER_0001663401 Spirometra erinaceieuropaei SPER_0001663401 I 0.597
SSLN_0000405401 Schistocephalus solidus SSLN_0000405401 I 0.429
TsM_000529300 Taenia solium TsM_000529300 I 0.467
TTAC_0000915101 Hydatigera taeniaeformis TTAC_0000915101 I 0.467
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.451
Cla016376 Citrullus lanatus Cla016376 I 0.460
WUBG_12491 Wuchereria bancrofti WUBG_12491 I 0.583
CGI_10006980 Crassostrea gigas CGI_10006980 I 0.470
CMM307C Cyanidioschyzon merolae CMM307C I 0.462
CMS239C Cyanidioschyzon merolae CMS239C I 0.483
CORT_0B08690 Candida orthopsilosis CORT_0B08690 I 0.423
ENSECAG00000019080 Equus caballus ENSECAG00000019080 I 0.577
ARID3B Echinops telfairi ENSETEG00000000100 I 0.596
ENSLACG00000006716 Latimeria chalumnae ENSLACG00000006716 I 0.572
ARID3B Loxodonta africana ENSLAFG00000002987 I 0.596
ARID3C Myotis lucifugus ENSMLUG00000022582 I 0.577
ENSOANG00000010382 Ornithorhynchus anatinus ENSOANG00000010382 I 0.594
ARID3B Procavia capensis ENSPCAG00000002708 I 0.566
ENSSARG00000003658 Sorex araneus ENSSARG00000003658 I 0.591
ENSSSCG00000022812 Sus scrofa ENSSSCG00000022812 I 0.583
ARID3B Tupaia belangeri ENSTBEG00000007576 I 0.566
ENSTSYG00000013728 Tarsius syrichta ENSTSYG00000013728 I 0.581
ENSVPAG00000003483 Vicugna pacos ENSVPAG00000003483 I 0.566
H311_02283 Anncaliia algerae H311_02283 I 0.444
HelroG76486 Helobdella robusta HelroG76486 I 0.463
ISCW010349 Ixodes scapularis ISCW010349 I 0.586
LotgiG131492 Lottia gigantea LotgiG131492 I 0.447
MESCA005201 Megaselia scalaris MESCA005201 I 0.475
NEMVEDRAFT_v1g42971 Nematostella vectensis NEMVEDRAFT_v1g42971 I 0.482
SPU_023530 Strongylocentrotus purpuratus SPU_023530 I 0.519
Aan_R014401 Calypte anna Aan_R014401 I 0.583
Cla007529 Citrullus lanatus Cla007529 I 0.462
Ogr03071 Ophisaurus gracilis Ogr03071 I 0.561
GLYMA06G36940 Glycine max GLYMA06G36940 N