CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
KDM5B
(
Erinaceus europaeus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
ENSEEUG00000000753
T014524_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000000667
ARID/BRIGHT
66
115
XXLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYN
Links
Other
ARID/BRIGHT
family TFs
Other
Erinaceus europaeus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G19490
Arabidopsis thaliana
AT1G19490
D
0.000
28779.m000140
Ricinus communis
28779.m000140
I
0.000
PK09783.1
Cannabis sativa
PK09783.1
I
0.000
Thhalv10009681m.g
Eutrema salsugineum
Thhalv10009681m.g
I
0.000
SapurV1A.0208s0130
Salix purpurea
SapurV1A.0208s0130
I
0.000
Lus10035597.g
Linum usitatissimum
Lus10035597.g
I
0.000
Lus10003255.g
Linum usitatissimum
Lus10003255.g
I
0.000
Gorai.009G405400
Gossypium raimondii
Gorai.009G405400
I
0.000
gene30252-v1.0-hybrid
Fragaria vesca
gene30252-v1.0-hybrid
I
0.000
evm.TU.supercontig_5.51
Carica papaya
evm.TU.supercontig_5.51
I
0.000
Carubv10011417m.g
Capsella rubella
Carubv10011417m.g
I
0.000
Cagra.1961s0053
Capsella grandiflora
Cagra.1961s0053
I
0.000
Bostr.7128s0552
Boechera stricta
Bostr.7128s0552
I
0.000
Cucsa.240980
Cucumis sativus
Cucsa.240980
I
0.000
Cla017983
Citrullus lanatus
Cla017983
I
0.000
VIT_08s0007g03640
Vitis vinifera
VIT_08s0007g03640
I
0.000
TCM_022516
Theobroma cacao
TCM_022516
I
0.000
PRUPE_ppa003901mg
Prunus persica
PRUPE_ppa003901mg
I
0.000
POPTR_0006s11550
Populus trichocarpa
POPTR_0006s11550
I
0.000
MTR_7g104190
Medicago truncatula
MTR_7g104190
I
0.000
GLYMA19G37801
Glycine max
GLYMA19G37801
I
0.000
GLYMA03G35101
Glycine max
GLYMA03G35101
I
0.000
Bra025743
Brassica rapa
Bra025743
I
0.000
Bo5g027510
Brassica oleracea
Bo5g027510
I
0.000
GSMUA_Achr5G17460_001
Musa acuminata
GSMUA_Achr5G17460_001
N
0.000