gene30252-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene30252-v1.0-hybrid T071852_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G19490
M09904_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G19490_01 		0.854 0.750
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30252.1-v1.0-hybrid bZIP 171 234

Links

Other bZIP family TFs
Other Fragaria vesca TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_022516 Theobroma cacao TCM_022516 I 0.879
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.865
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.865
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.865
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.862
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.862
Cla017983 Citrullus lanatus Cla017983 I 0.862
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.862
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.860
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.859
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I 0.859
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.858
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.854
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.854
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.854
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.854
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.854
PK09783.1 Cannabis sativa PK09783.1 I 0.848
28779.m000140 Ricinus communis 28779.m000140 I 0.843
Bo5g027510 Brassica oleracea Bo5g027510 I 0.837
Bra025743 Brassica rapa Bra025743 I 0.837
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.832
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.824
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.824
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.823
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.811
Ca_00780 Cicer arietinum Ca_00780 I 0.798
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.793