Cagra.1961s0053 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.1961s0053 T071502_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G19490
M09904_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G19490_01 		0.889 0.984
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1961s0053.1.p bZIP 152 215

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.901
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.901
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.889
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.889
TCM_022516 Theobroma cacao TCM_022516 I 0.873
Bo5g027510 Brassica oleracea Bo5g027510 I 0.872
Bra025743 Brassica rapa Bra025743 I 0.872
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.860
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.860
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.859
28779.m000140 Ricinus communis 28779.m000140 I 0.857
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.856
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.856
Cla017983 Citrullus lanatus Cla017983 I 0.856
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.856
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.855
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.854
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.852
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.846
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I 0.846
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.826
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.823
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.819
PK09783.1 Cannabis sativa PK09783.1 I 0.819
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.805
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.805
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.804
MDP0000147745 Malus domestica MDP0000147745 I 0.794
Ca_00780 Cicer arietinum Ca_00780 I 0.792
Solyc09g009760.1 Solanum lycopersicum Solyc09g009760.1 I 0.791
MDP0000203904 Malus domestica MDP0000203904 I 0.790