ENSTRUG00000001547 (Takifugu rubripes)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSTRUG00000001547 T014804_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.687 0.651
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.687 0.651
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.660 0.663
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.616 0.581
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.616 0.581
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.616 0.581
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.616 0.581
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.520 0.547
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000003550 ARID/BRIGHT 336 422

Links

Other ARID/BRIGHT family TFs
Other Takifugu rubripes TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.000
Cla004701 Citrullus lanatus Cla004701 I 0.000
29917.m002016 Ricinus communis 29917.m002016 I 0.000
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.000
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.000
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.000
mgf018486m Mimulus guttatus mgf018486m I 0.000
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.000
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.000
Pm015625 Prunus mume Pm015625 I 0.000
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I 0.000
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.000
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.000
MDP0000663564 Malus domestica MDP0000663564 I 0.000
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.000
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.000
PK17141.1 Cannabis sativa PK17141.1 I 0.000
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.000
MTR_7g033320 Medicago truncatula MTR_7g033320 I 0.000
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.000
GLYMA05G09110 Glycine max GLYMA05G09110 I 0.000
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.000
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.000
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.000
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.000
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.000
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.000
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I 0.000
TCM_016984 Theobroma cacao TCM_016984 I 0.000
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.000
OBART02G22660 Oryza barthii OBART02G22660 N 0.000
OB02G30060 Oryza brachyantha OB02G30060 N 0.000
Lus10003668.g Linum usitatissimum Lus10003668.g N 0.000
MDP0000283975 Malus domestica MDP0000283975 N 0.000
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.000
GLYMA19G00640 Glycine max GLYMA19G00640 N 0.000
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.000
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N 0.000
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.000