CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.241440
(
Cucumis sativus
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cucsa.241440
T022370_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.241440.1
B3
2
119
FEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPSAAVATAAAAAAAGDSADKGLLLSFEDESGKIWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHRRDGDRLFIGWKKRS
Links
Other
B3
family TFs
Other
Cucumis sativus
TFs
273 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYF5
Homo sapiens
ENSG00000111049
D
MYOD1
Homo sapiens
ENSG00000129152
D
Myf5
Mus musculus
ENSMUSG00000000435
D
Myod1
Mus musculus
ENSMUSG00000009471
D
nau
Drosophila melanogaster
FBgn0002922
D
CpipJ_CPIJ005345
Culex pipiens
CpipJ_CPIJ005345
I
AAEL014322
Aedes aegypti
AAEL014322
I
ADAC002492
Anopheles darlingi
ADAC002492
I
CPIJ005345
Culex quinquefasciatus
CPIJ005345
I
MYOD1
Anolis carolinensis
ENSACAG00000000054
I
MYF5
Anolis carolinensis
ENSACAG00000014431
I
ENSAMEG00000013193
Ailuropoda melanoleuca
ENSAMEG00000013193
I
ENSAMEG00000018197
Ailuropoda melanoleuca
ENSAMEG00000018197
I
ENSAMXG00000000428
Astyanax mexicanus
ENSAMXG00000000428
I
ENSAMXG00000017040
Astyanax mexicanus
ENSAMXG00000017040
I
ENSAPLG00000001124
Anas platyrhynchos
ENSAPLG00000001124
I
ENSAPLG00000005673
Anas platyrhynchos
ENSAPLG00000005673
I
MYOD1
Bos taurus
ENSBTAG00000002216
I
MYF5
Bos taurus
ENSBTAG00000026972
I
MYF5
Canis familiaris
ENSCAFG00000005808
I
MYOD1
Canis familiaris
ENSCAFG00000009066
I
MYF5
Choloepus hoffmanni
ENSCHOG00000008319
I
MYOD1
Callithrix jacchus
ENSCJAG00000009258
I
MYF5
Callithrix jacchus
ENSCJAG00000019340
I
MYF5
Cavia porcellus
ENSCPOG00000007766
I
MYOD1
Cavia porcellus
ENSCPOG00000021351
I
ENSCSAG00000003889
Chlorocebus sabaeus
ENSCSAG00000003889
I
ENSCSAG00000004934
Chlorocebus sabaeus
ENSCSAG00000004934
I
myf5
Danio rerio
ENSDARG00000007277
I
myod1
Danio rerio
ENSDARG00000030110
I
MYOD1
Dasypus novemcinctus
ENSDNOG00000017164
I
MYF5
Dasypus novemcinctus
ENSDNOG00000034747
I
Myf5
Dipodomys ordii
ENSDORG00000015437
I
MYOD1
Equus caballus
ENSECAG00000002132
I
MYF5
Equus caballus
ENSECAG00000020047
I
MYF5
Erinaceus europaeus
ENSEEUG00000011612
I
MYOD1
Echinops telfairi
ENSETEG00000003979
I
MYF5
Echinops telfairi
ENSETEG00000011255
I
ENSFALG00000000758
Ficedula albicollis
ENSFALG00000000758
I
ENSFALG00000010507
Ficedula albicollis
ENSFALG00000010507
I
MYOD1
Felis catus
ENSFCAG00000004973
I
MYF5
Felis catus
ENSFCAG00000015011
I
myod1
Gasterosteus aculeatus
ENSGACG00000008444
I
myod1
Gasterosteus aculeatus
ENSGACG00000017350
I
MYOD1
Gallus gallus
ENSGALG00000006216
I
MYF5
Gallus gallus
ENSGALG00000028091
I
MYF5
Gorilla gorilla
ENSGGOG00000004366
I
MYOD1
Gorilla gorilla
ENSGGOG00000008222
I
ENSGMOG00000011389
Gadus morhua
ENSGMOG00000011389
I
ENSGMOG00000016963
Gadus morhua
ENSGMOG00000016963
I
ENSLACG00000014430
Latimeria chalumnae
ENSLACG00000014430
I
MYF5
Loxodonta africana
ENSLAFG00000016473
I
MYOD1
Loxodonta africana
ENSLAFG00000018353
I
ENSLOCG00000002164
Lepisosteus oculatus
ENSLOCG00000002164
I
ENSMEUG00000010628
Macropus eugenii
ENSMEUG00000010628
I
ENSMEUG00000014270
Macropus eugenii
ENSMEUG00000014270
I
ENSMGAG00000007210
Meleagris gallopavo
ENSMGAG00000007210
I
ENSMGAG00000011091
Meleagris gallopavo
ENSMGAG00000011091
I
MYOD1
Microcebus murinus
ENSMICG00000005566
I
ENSMICG00000011211
Microcebus murinus
ENSMICG00000011211
I
MYF5
Myotis lucifugus
ENSMLUG00000004943
I
MYOD1
Myotis lucifugus
ENSMLUG00000007940
I
MYOD1
Macaca mulatta
ENSMMUG00000006400
I
MYF5
Macaca mulatta
ENSMMUG00000011669
I
MYOD1
Monodelphis domestica
ENSMODG00000006749
I
MYF5
Monodelphis domestica
ENSMODG00000020478
I
ENSMPUG00000004935
Mustela putorius furo
ENSMPUG00000004935
I
ENSMPUG00000013563
Mustela putorius furo
ENSMPUG00000013563
I
ENSNLEG00000005207
Nomascus leucogenys
ENSNLEG00000005207
I
MYF5
Ornithorhynchus anatinus
ENSOANG00000004853
I
ENSOARG00000015159
Ovis aries
ENSOARG00000015159
I
ENSOARG00000025174
Ovis aries
ENSOARG00000025174
I
MYF5
Oryctolagus cuniculus
ENSOCUG00000025477
I
MYF5
Otolemur garnettii
ENSOGAG00000001039
I
MYOD1
Otolemur garnettii
ENSOGAG00000029784
I
ENSONIG00000000077
Oreochromis niloticus
ENSONIG00000000077
I
ENSONIG00000007897
Oreochromis niloticus
ENSONIG00000007897
I
ENSONIG00000010796
Oreochromis niloticus
ENSONIG00000010796
I
MYOD1
Ochotona princeps
ENSOPRG00000002390
I
MYF6
Ochotona princeps
ENSOPRG00000008999
I
MYF5
Ochotona princeps
ENSOPRG00000009007
I
myod1
Oryzias latipes
ENSORLG00000000694
I
myf5
Oryzias latipes
ENSORLG00000016257
I
ENSPANG00000011946
Papio anubis
ENSPANG00000011946
I
ENSPANG00000020394
Papio anubis
ENSPANG00000020394
I
MYOD1
Procavia capensis
ENSPCAG00000001317
I
MYF5
Procavia capensis
ENSPCAG00000001722
I
ENSPFOG00000009843
Poecilia formosa
ENSPFOG00000009843
I
ENSPFOG00000013532
Poecilia formosa
ENSPFOG00000013532
I
ENSPFOG00000017488
Poecilia formosa
ENSPFOG00000017488
I
ENSPPYG00000003449
Pongo abelii
ENSPPYG00000003449
I
ENSPPYG00000004800
Pongo abelii
ENSPPYG00000004800
I
ENSPSIG00000012000
Pelodiscus sinensis
ENSPSIG00000012000
I
MYOD1
Pan troglodytes
ENSPTRG00000003406
I
MYF5
Pan troglodytes
ENSPTRG00000005261
I
MYF5
Pteropus vampyrus
ENSPVAG00000003336
I
MYOD1
Pteropus vampyrus
ENSPVAG00000012829
I
Myf5
Rattus norvegicus
ENSRNOG00000004768
I
Myod1
Rattus norvegicus
ENSRNOG00000011306
I
ENSSARG00000002401
Sorex araneus
ENSSARG00000002401
I
MYF5
Sorex araneus
ENSSARG00000008217
I
ENSSHAG00000013391
Sarcophilus harrisii
ENSSHAG00000013391
I
ENSSHAG00000017220
Sarcophilus harrisii
ENSSHAG00000017220
I
MYF5
Sus scrofa
ENSSSCG00000000937
I
MYOD1
Sus scrofa
ENSSSCG00000013375
I
ENSSTOG00000011556
Ictidomys tridecemlineatus
ENSSTOG00000011556
I
ENSSTOG00000015810
Ictidomys tridecemlineatus
ENSSTOG00000015810
I
MYOD1
Tupaia belangeri
ENSTBEG00000003438
I
MYF5
Tupaia belangeri
ENSTBEG00000008363
I
ENSTGUG00000007755
Taeniopygia guttata
ENSTGUG00000007755
I
MYOD1
Taeniopygia guttata
ENSTGUG00000008814
I
myod1
Tetraodon nigroviridis
ENSTNIG00000002808
I
myod1
Tetraodon nigroviridis
ENSTNIG00000018793
I
myod2
Takifugu rubripes
ENSTRUG00000014891
I
myod1
Takifugu rubripes
ENSTRUG00000016609
I
ENSTSYG00000003282
Tarsius syrichta
ENSTSYG00000003282
I
MYOD1
Tursiops truncatus
ENSTTRG00000013869
I
MYF5
Tursiops truncatus
ENSTTRG00000014691
I
MYF5
Vicugna pacos
ENSVPAG00000001927
I
ENSXMAG00000007430
Xiphophorus maculatus
ENSXMAG00000007430
I
ENSXMAG00000017496
Xiphophorus maculatus
ENSXMAG00000017496
I
GA10192
Drosophila pseudoobscura
FBgn0070251
I
GF18746
Drosophila ananassae
FBgn0095763
I
GG12413
Drosophila erecta
FBgn0104701
I
GH13904
Drosophila grimshawi
FBgn0121380
I
GI24830
Drosophila mojavensis
FBgn0147551
I
GL13832
Drosophila persimilis
FBgn0151437
I
GM23547
Drosophila sechellia
FBgn0178413
I
GD18361
Drosophila simulans
FBgn0189889
I
GJ24474
Drosophila virilis
FBgn0211554
I
GK22777
Drosophila willistoni
FBgn0224749
I
GE23932
Drosophila yakuba
FBgn0241076
I
PHUM424120
Pediculus humanus
PHUM424120
I
Aan_R006542
Calypte anna
Aan_R006542
I
Afo_R014556
Aptenodytes forsteri
Afo_R014556
I
Alligator_sinensis_CCG013129.1
Alligator sinensis
Alligator_sinensis_CCG013129.1
I
Alligator_sinensis_CCG017419.1
Alligator sinensis
Alligator_sinensis_CCG017419.1
I
Brh_R000054
Buceros rhinoceros
Brh_R000054
I
Brh_R006718
Buceros rhinoceros
Brh_R006718
I
ENSBTAP00000002868-D1
Bos grunniens
ENSBTAP00000002868-D1
I
ENSP00000228644
Macaca fascicularis
ENSP00000228644
I
Gfo_R009107
Geospiza fortis
Gfo_R009107
I
Myotis_brandtii_MYF5_10034131
Myotis brandtii
Myotis_brandtii_MYF5_10034131
I
Ogr16343
Ophisaurus gracilis
Ogr16343
I
Pvit_01710
Pogona vitticeps
Pvit_01710
I
AAL11024
Xenopus tropicalis
AAL11024
I
LCUP007809
Lucilia cuprina
LCUP007809
I
myod1
Xenopus tropicalis
XB-GENE-1017498
I
myod1.S
Xenopus laevis
XB-GENE-1017506
I
myf5
Xenopus tropicalis
XB-GENE-493550
I
myod1.L
Xenopus laevis
XB-GENE-6252600
I
myf5.L
Xenopus laevis
XB-GENE-866267
I
AALB008334
Anopheles albimanus
AALB008334
I
AARA002094
Anopheles arabiensis
AARA002094
I
AATE018889
Anopheles atroparvus
AATE018889
I
ACHR010174
Anopheles christyi
ACHR010174
I
ACOM034431
Anopheles coluzzii
ACOM034431
I
ACUA006973
Anopheles culicifacies
ACUA006973
I
ADIR010448
Anopheles dirus
ADIR010448
I
AEPI006062
Anopheles epiroticus
AEPI006062
I
AFAF001067
Anopheles farauti
AFAF001067
I
AFUN011634
Anopheles funestus
AFUN011634
I
AMAM006832
Anopheles maculatus
AMAM006832
I
AMEM001613
Anopheles merus
AMEM001613
I
AMIN003460
Anopheles minimus
AMIN003460
I
AQUA000514
Anopheles quadriannulatus
AQUA000514
I
ASTEI05690
Anopheles stephensi
ASTEI05690
I