Carubv10006513m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10006513m.g T022841_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006513m B3 126 228
Carubv10006513m B3 589 642

Links

Other B3 family TFs
Other Capsella rubella TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.704
TCM_027113 Theobroma cacao TCM_027113 I 0.731
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.766
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.717
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.700
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.701
Ca_17636 Cicer arietinum Ca_17636 N 0.733
Cla001927 Citrullus lanatus Cla001927 N 0.728
Cla015243 Citrullus lanatus Cla015243 N 0.762
29609.m000587 Ricinus communis 29609.m000587 N 0.770
29742.m001397 Ricinus communis 29742.m001397 N 0.820
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.735
mgf006427m Mimulus guttatus mgf006427m N 0.704
Cagra.1226s0063 Capsella grandiflora Cagra.1226s0063 N 0.987
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.703
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.754
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.724
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.752
Al_scaffold_0001_3749 Arabidopsis lyrata Al_scaffold_0001_3749 N 0.707
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.740
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.738
ARF7 Oryza sativa OS02G0557200 N 0.728
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.728
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.723
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.723
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.728
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.728
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.728
OBART02G20600 Oryza barthii OBART02G20600 N 0.728
MTR_8g027440 Medicago truncatula MTR_8g027440 N 0.720
GSMUA_Achr2G19760_001 Musa acuminata GSMUA_Achr2G19760_001 N 0.753
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.723
ARF1 Arabidopsis thaliana AT1G59750 N 0.731
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.760