29742.m001397 (Ricinus communis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 29742.m001397 T022166_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29742.m001397 B3 139 241
29742.m001397 B3 572 626

Links

Other B3 family TFs
Other Ricinus communis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.836
Carubv10006513m.g Capsella rubella Carubv10006513m.g N 0.820
Cagra.1226s0063 Capsella grandiflora Cagra.1226s0063 N 0.816
Cla015243 Citrullus lanatus Cla015243 N 0.810
GSMUA_Achr2G19760_001 Musa acuminata GSMUA_Achr2G19760_001 N 0.803
29609.m000587 Ricinus communis 29609.m000587 N 0.791
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.788
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.786
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.781
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.781
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.779
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.773
mgf024961m Mimulus guttatus mgf024961m N 0.772
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.768
ARF1 Arabidopsis thaliana AT1G59750 N 0.766
TCM_027113 Theobroma cacao TCM_027113 I 0.761
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.759
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.759
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.759
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.759
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.759
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.759
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.757
ARF7 Oryza sativa OS02G0557200 N 0.757
OBART02G20600 Oryza barthii OBART02G20600 N 0.757
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.757
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.757
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.757
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.757
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N 0.756
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.752
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.752
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.752
MTR_8g027440 Medicago truncatula MTR_8g027440 N 0.752
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.752
Cla001927 Citrullus lanatus Cla001927 N 0.750
Ca_17636 Cicer arietinum Ca_17636 N 0.748
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.746
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.739
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.732
mgf006427m Mimulus guttatus mgf006427m N 0.732
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.729
GLYMA12G28550 Glycine max GLYMA12G28550 N 0.725
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N 0.714
Bo4g083590 Brassica oleracea Bo4g083590 N 0.709
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N 0.703
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.702
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.702
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.702
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.702
OPUNC12G10620 Oryza punctata OPUNC12G10620 N 0.702
OBART12G11990 Oryza barthii OBART12G11990 N 0.702
ARF24 Oryza sativa OS12G0479400 N 0.702
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.702
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.702