CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Eb00031
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Eb00031
T023838_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb00031.1.p
B3
131
222
FVKRMLQSHVVRGFWLGLPTYFCNKHLPKEDTGIVLEDENGQDHQTLYLGAKQGLSAGWRGFAIKHDIKVGDVVIFQLVGSTKFKVYIIRAN
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm001404
Prunus mume
Pm001404
N
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
MDP0000252746
Malus domestica
MDP0000252746
N
MDP0000252435
Malus domestica
MDP0000252435
N
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
28629.m000575
Ricinus communis
28629.m000575
N
GLYMA03G35570
Glycine max
GLYMA03G35570
N
Pm001403
Prunus mume
Pm001403
N
TCM_022690
Theobroma cacao
TCM_022690
N
TCM_022676
Theobroma cacao
TCM_022676
N
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
GLYMA19G38211
Glycine max
GLYMA19G38211
N