CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava15680.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava15680.m1
T296830_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava15680.m1
NAC/NAM
5
139
APGIRFYPTEEELVSFYLHHKLEGERDDLNRLMDRVIPVLDIYEYSPWQLPQYAGEFSHGDPEQWFFFIKRQENEARGGRPRRLTTAGYWKATGSPGYVYSSNNRCIGVKRTMVFYTGRAPLGRKTEWKMNEYKT
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_022676
Theobroma cacao
TCM_022676
N
0.992
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.991
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.988
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.984
TCM_022690
Theobroma cacao
TCM_022690
N
0.984
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.984
Gorai.009G399900
Gossypium raimondii
Gorai.009G399900
N
0.984
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
0.984
28629.m000575
Ricinus communis
28629.m000575
N
0.983
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.982
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
0.976
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.973
VIT_08s0007g02940
Vitis vinifera
VIT_08s0007g02940
N
0.970
Cla018692
Citrullus lanatus
Cla018692
N
0.955
30032.m000479
Ricinus communis
30032.m000479
N
0.942
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.927
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.923
MDP0000252435
Malus domestica
MDP0000252435
N
0.923
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.922
Pm001403
Prunus mume
Pm001403
N
0.922
PK29014.1
Cannabis sativa
PK29014.1
N
0.918
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.916
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.908
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.901
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.899
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.895
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.894
PK27925.1
Cannabis sativa
PK27925.1
N
0.894
mgf020234m
Mimulus guttatus
mgf020234m
N
0.893
MDP0000506233
Malus domestica
MDP0000506233
N
0.891
Cla018691
Citrullus lanatus
Cla018691
N
0.888
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.888
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.888
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.886
MDP0000130797
Malus domestica
MDP0000130797
N
0.886
MDP0000759504
Malus domestica
MDP0000759504
N
0.886
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.883
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.880
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.880
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.879