CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g039532m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g039532m.g
T298700_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g039532m
NAC/NAM
6
140
PPGFRFYPTEEELVSFYLHNKLAGHRQDLNLQMDRIIPVINIYDYNPWDLPQFSQLLCHRDPEQWFFFIPRQESEARGGRPNRLTSAGYWKATGSPGLVYSSNNRPVGEKRTMVFYRGRAPNGRKTEWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.997
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.992
TCM_022676
Theobroma cacao
TCM_022676
N
0.992
TCM_022690
Theobroma cacao
TCM_022690
N
0.989
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.988
28629.m000575
Ricinus communis
28629.m000575
N
0.987
Gorai.009G399900
Gossypium raimondii
Gorai.009G399900
N
0.985
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.984
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
0.983
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.982
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.982
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.977
VIT_08s0007g02940
Vitis vinifera
VIT_08s0007g02940
N
0.967
Cla018692
Citrullus lanatus
Cla018692
N
0.957
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.940
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.937
MDP0000252435
Malus domestica
MDP0000252435
N
0.934
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.924
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.920
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.914
Pm001403
Prunus mume
Pm001403
N
0.914
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.910
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.910
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.904
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.903
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.900
MDP0000506233
Malus domestica
MDP0000506233
N
0.899
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.894
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.894
mgf020234m
Mimulus guttatus
mgf020234m
N
0.894
Aquca_072_00079
Aquilegia coerulea
Aquca_072_00079
N
0.888
PK27925.1
Cannabis sativa
PK27925.1
N
0.885
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.884
Cla018691
Citrullus lanatus
Cla018691
N
0.884
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.883
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.882
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.880
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.880
PK29014.1
Cannabis sativa
PK29014.1
N
0.880
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.878
MDP0000252746
Malus domestica
MDP0000252746
N
0.877
MDP0000130797
Malus domestica
MDP0000130797
N
0.876
MDP0000759504
Malus domestica
MDP0000759504
N
0.876
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.873