CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.009G399900
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.009G399900
T298146_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G399900.1
NAC/NAM
5
139
APGFRFYPTEEELVSFYLHHKLEMEREDLNRLMDRVIPIVNIYEFNPWDLPQFSAYLCHKDPEQWFFFIPWQESEARGGRPKRLTTTGYWKATGSPGFVYSSGNRPIGVKRTMVFYNGRAPNGIRTEWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.991
TCM_022676
Theobroma cacao
TCM_022676
N
0.991
TCM_022690
Theobroma cacao
TCM_022690
N
0.990
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.985
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
0.985
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.984
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.981
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.980
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.978
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
0.977
28629.m000575
Ricinus communis
28629.m000575
N
0.976
VIT_08s0007g02940
Vitis vinifera
VIT_08s0007g02940
N
0.953
Cla018692
Citrullus lanatus
Cla018692
N
0.953
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.952
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.926
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.925
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.921
PK29014.1
Cannabis sativa
PK29014.1
N
0.897
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.895
MDP0000252435
Malus domestica
MDP0000252435
N
0.889
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.888
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.882
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.879
Pm001403
Prunus mume
Pm001403
N
0.879
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.871
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.871