CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
30032.m000479
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
30032.m000479
T296778_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30032.m000479
NAC/NAM
5
139
APGVRFYPTEEELVSFYLHHKLEGNRNDLNQVLDLVIPVLDIYEFSPWELPQYSGIYNRTDPEQWFLFIPRQESEVRGGRSKRLTTVGYWKATGSPGYVYSSDNRCIAVKRTMVFYKGRAPKGHKTDWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.942
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.926
TCM_022676
Theobroma cacao
TCM_022676
N
0.907
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.900
MDP0000252435
Malus domestica
MDP0000252435
N
0.899
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.893
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.890
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.890
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.889
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.878
PK29014.1
Cannabis sativa
PK29014.1
N
0.872