CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene01678-v1.0-hybrid
(
Fragaria vesca
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
gene01678-v1.0-hybrid
T024854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna01678.1-v1.0-hybrid
BBR
1
310
MDDGRHENGRHKPDYYRGAPSPWNMTAQQQVKEPNALVMNKKIMSIIAERDAAIRERNAAISEKNEALAARDEALRQRDEAFSQRDTALMERDNAFAAFHIRDNSMNFPLGGGAQRGSKRMHYPSHHPVNMADGPYSTKDVPITEAFPISVLSAEAIKSRQTKRSKQNKASRASKPSRKKVGEDLNRQASTDGIKYRSEWDTQDLGLNLVSFDETTMPVPVCSCTGMPRQCYKWGNGGWQSSCCTTNMSMYPLPQMPNKRHARMGGRKMSGSVFTRLLSRLAAEGHDLSVPLDLKEYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Fragaria vesca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ISCW008081
Ixodes scapularis
ISCW008081
I
0.000
LOAG_16319
Loa loa
LOAG_16319
I
0.000
MCINX002723
Melitaea cinxia
MCINX002723
I
0.000
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.000
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.000
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.000
CBN22200
Caenorhabditis brenneri
CBN22200
N
0.000
L893_g6531
Steinernema glaseri
L893_g6531
N
0.000
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.000
TMUE_s0040003800
Trichuris muris
TMUE_s0040003800
N
0.000