CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0074s0330
(
Salix purpurea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
SapurV1A.0074s0330
T024894_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0074s0330.1.p
BBR
1
287
MDEDNSLNIRNWGYYEPTPVKGNLGLQLMSSTMPEKSFLGSRSAAIMTSMNGGFNHKDVGVSQPMHPMEYMRGAWIGQREKFINVLPGNHNYAAVFPETSSAHHMQVFQPPYSTKDEPLELVEEAGVVEKVNGPNKKRQRQKAPKSPKSPKAKKGKRAPQVPKPEGTLSAQRVRSAKKTAEIMINGIHMDISVIPIPVCSCTGNPQQCYRWGCGGWQSACCTTCLSVYPLPMSMKRRGARIAGRKMSLGAFKKVLEKLAGEGYDFSNPIDLRTHWAKHGTNKFVTIR
SapurV1A.0074s0330.2.p
BBR
1
287
MDEDNSLNIRNWGYYEPTPVKGNLGLQLMSSTMPEKSFLGSRSAAIMTSMNGGFNHKDVGVSQPMHPMEYMRGAWIGQREKFINVLPGNHNYAAVFPETSSAHHMQVFQPPYSTKDEPLELVEEAGVVEKVNGPNKKRQRQKAPKSPKSPKAKKGKRAPQVPKPEGTLSAQRVRSAKKTAEIMINGIHMDISVIPIPVCSCTGNPQQCYRWGCGGWQSACCTTCLSVYPLPMSMKRRGARIAGRKMSLGAFKKVLEKLAGEGYDFSNPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Salix purpurea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.857
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.838
POPTR_0012s03740
Populus trichocarpa
POPTR_0012s03740
N
0.817
POPTR_0012s03750
Populus trichocarpa
POPTR_0012s03750
N
0.810
POPTR_0012s03760
Populus trichocarpa
POPTR_0012s03760
N
0.713
POPTR_0015s05200
Populus trichocarpa
POPTR_0015s05200
N
0.872
POPTR_0015s05210
Populus trichocarpa
POPTR_0015s05210
N
0.974
VIT_17s0000g01860
Vitis vinifera
VIT_17s0000g01860
N
0.728
SapurV1A.0074s0340
Salix purpurea
SapurV1A.0074s0340
N
0.865
SapurV1A.1169s0060
Salix purpurea
SapurV1A.1169s0060
N
0.770