PAS_chr3_0260 (Komagataella pastoris)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 PAS_chr3_0260 T027223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CAY70297 BED ZF 159 205

Links

Other BED ZF family TFs
Other Komagataella pastoris TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10003333.g Linum usitatissimum Lus10003333.g N
Carubv10014350m.g Capsella rubella Carubv10014350m.g N
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N
Gorai.003G003900 Gossypium raimondii Gorai.003G003900 N
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N
Lus10022636.g Linum usitatissimum Lus10022636.g N
MDP0000480581 Malus domestica MDP0000480581 N
MDP0000868556 Malus domestica MDP0000868556 N
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N
Solyc10g055760.1 Solanum lycopersicum Solyc10g055760.1 N
Bo3g092020 Brassica oleracea Bo3g092020 N
Bo7g015050 Brassica oleracea Bo7g015050 N
Bra013034 Brassica rapa Bra013034 N
anac036 Arabidopsis lyrata fgenesh2_kg.3__3291__AT2G17040.1 N
MTR_4g075980 Medicago truncatula MTR_4g075980 N
PGSC0003DMG400010870 Solanum tuberosum PGSC0003DMG400010870 N
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N
anac036 Arabidopsis thaliana AT2G17040 N
TCM_006499 Theobroma cacao TCM_006499 N
Pm020961 Prunus mume Pm020961 N
29797.m000353 Ricinus communis 29797.m000353 N
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N
mgf013168m Mimulus guttatus mgf013168m N
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N