CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.002G001900
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.002G001900
T298044_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G001900.1
NAC/NAM
11
138
LPGFRFHPTEEELLEFYLRNIVYGKMLSYDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPIDRKHGKGGRPNRTTKNGFWKATGSDRKIVSLSDQKKMIGFKKTLVFYKGRAQRGCKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_006499
Theobroma cacao
TCM_006499
N
0.937
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
0.935
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
0.930
Pm020961
Prunus mume
Pm020961
N
0.930
MDP0000480581
Malus domestica
MDP0000480581
N
0.925
MDP0000868556
Malus domestica
MDP0000868556
N
0.925
gene17203-v1.0-hybrid
Fragaria vesca
gene17203-v1.0-hybrid
N
0.924
Ciclev10029007m.g
Citrus clementina
Ciclev10029007m.g
N
0.917
orange1.1g023427m.g
Citrus sinensis
orange1.1g023427m.g
N
0.917
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
0.915
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
0.911
anac036
Arabidopsis thaliana
AT2G17040
N
0.908
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
0.908
29797.m000353
Ricinus communis
29797.m000353
N
0.907
POPTR_0004s18860
Populus trichocarpa
POPTR_0004s18860
N
0.902
Gorai.005G257800
Gossypium raimondii
Gorai.005G257800
N
0.901
SapurV1A.0080s0480
Salix purpurea
SapurV1A.0080s0480
N
0.900
MTR_4g075980
Medicago truncatula
MTR_4g075980
N
0.898
POPTR_0009s14370
Populus trichocarpa
POPTR_0009s14370
N
0.898
GLYMA11G10230
Glycine max
GLYMA11G10230
N
0.895
GLYMA12G02540
Glycine max
GLYMA12G02540
N
0.895
cassava13355.valid.m1
Manihot esculenta
cassava13355.valid.m1
N
0.894
chr3.CM0460.350.nd
Lotus japonicus
chr3.CM0460.350.nd
N
0.892
SapurV1A.0218s0020
Salix purpurea
SapurV1A.0218s0020
N
0.891
Bostr.18351s0165
Boechera stricta
Bostr.18351s0165
N
0.886
mgf013168m
Mimulus guttatus
mgf013168m
N
0.885
Bo7g015050
Brassica oleracea
Bo7g015050
N
0.880
VIT_04s0008g00150
Vitis vinifera
VIT_04s0008g00150
N
0.877
Aquca_015_00469
Aquilegia coerulea
Aquca_015_00469
N
0.877
Ca_11128
Cicer arietinum
Ca_11128
N
0.875
Bra002018
Brassica rapa
Bra002018
N
0.871