Gfo_R012738 (Geospiza fortis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gfo_R012738 T028002_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R012738 BED ZF 292 325

Links

Other BED ZF family TFs
Other Geospiza fortis TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SP1 Homo sapiens ENSG00000185591 D
Sp1 Mus musculus ENSMUSG00000001280 D
sptf-3 Caenorhabditis elegans WBGene00012735 D
CpipJ_CPIJ003609 Culex pipiens CpipJ_CPIJ003609 I
AAEL003875 Aedes aegypti AAEL003875 I
ACYPI008586 Acyrthosiphon pisum ACYPI008586 I
ADAC004751 Anopheles darlingi ADAC004751 I
AGAP004438 Anopheles gambiae AGAP004438 I
Bm6499 Brugia malayi Bm6499 I
CapteG112714 Capitella teleta CapteG112714 I
CBG20386 Caenorhabditis briggsae CBG20386 I
CGI_10013026 Crassostrea gigas CGI_10013026 I
CPIJ003609 Culex quinquefasciatus CPIJ003609 I
CRE28577 Caenorhabditis remanei CRE28577 I
EFV52785 Trichinella spiralis EFV52785 I
SP1 Anolis carolinensis ENSACAG00000000610 I
ENSAMEG00000012479 Ailuropoda melanoleuca ENSAMEG00000012479 I
ENSAPLG00000007170 Anas platyrhynchos ENSAPLG00000007170 I
SP1 Bos taurus ENSBTAG00000003021 I
SP1 Canis familiaris ENSCAFG00000006950 I
SP1 Choloepus hoffmanni ENSCHOG00000001703 I
SP1 Callithrix jacchus ENSCJAG00000018553 I
SP1 Cavia porcellus ENSCPOG00000023095 I
ENSCSAG00000005498 Chlorocebus sabaeus ENSCSAG00000005498 I
SP1 Dasypus novemcinctus ENSDNOG00000017346 I
ENSECAG00000020197 Equus caballus ENSECAG00000020197 I
SP1 Erinaceus europaeus ENSEEUG00000013568 I
SP1 Felis catus ENSFCAG00000030741 I
ENSGALG00000028401 Gallus gallus ENSGALG00000028401 I
SP1 Gorilla gorilla ENSGGOG00000012593 I
SP1 Loxodonta africana ENSLAFG00000018043 I
ENSMEUG00000004493 Macropus eugenii ENSMEUG00000004493 I
SP1 Myotis lucifugus ENSMLUG00000017303 I
SP1 Macaca mulatta ENSMMUG00000020036 I
ENSNLEG00000017699 Nomascus leucogenys ENSNLEG00000017699 I
ENSOARG00000016514 Ovis aries ENSOARG00000016514 I
SP1 Oryctolagus cuniculus ENSOCUG00000004147 I
ENSONIG00000005121 Oreochromis niloticus ENSONIG00000005121 I
SP1 Ochotona princeps ENSOPRG00000000691 I
sp1 Oryzias latipes ENSORLG00000005195 I
ENSPANG00000018241 Papio anubis ENSPANG00000018241 I
SP1 Procavia capensis ENSPCAG00000004934 I
ENSPFOG00000007682 Poecilia formosa ENSPFOG00000007682 I
ENSPMAG00000000389 Petromyzon marinus ENSPMAG00000000389 I
ENSPMAG00000008063 Petromyzon marinus ENSPMAG00000008063 I
ENSPPYG00000004579 Pongo abelii ENSPPYG00000004579 I
ENSPSIG00000007013 Pelodiscus sinensis ENSPSIG00000007013 I
SP1 Pan troglodytes ENSPTRG00000005014 I
SP1 Pteropus vampyrus ENSPVAG00000012280 I
Sp1 Rattus norvegicus ENSRNOG00000014084 I
SP1 Sorex araneus ENSSARG00000013480 I
SP1 Sus scrofa ENSSSCG00000000272 I
ENSSTOG00000005928 Ictidomys tridecemlineatus ENSSTOG00000005928 I
SP1 Tupaia belangeri ENSTBEG00000010202 I
SP1 Taeniopygia guttata ENSTGUG00000015642 I
sp1 Tetraodon nigroviridis ENSTNIG00000007066 I
sp1 Takifugu rubripes ENSTRUG00000014305 I
ENSTSYG00000001068 Tarsius syrichta ENSTSYG00000001068 I
SP1 Tursiops truncatus ENSTTRG00000009591 I
ENSXMAG00000017829 Xiphophorus maculatus ENSXMAG00000017829 I
LOAG_01580 Loa loa LOAG_01580 I
SMAR004952 Strigamia maritima SMAR004952 I
SPU_009831 Strongylocentrotus purpuratus SPU_009831 I
SPU_009832 Strongylocentrotus purpuratus SPU_009832 I
WBGene00237583 Onchocerca volvulus WBGene00237583 I
WBGene00237584 Onchocerca volvulus WBGene00237584 I
Aan_R009568 Calypte anna Aan_R009568 I
Alligator_sinensis_CCG005388.1 Alligator sinensis Alligator_sinensis_CCG005388.1 I
Cflo_10237--XP_624316.2_APIME Camponotus floridanus Cflo_10237--XP_624316.2_APIME I
Cmyd_10006878 Chelonia mydas Cmyd_10006878 I
ENSBTAP00000003929-D1 Bos grunniens ENSBTAP00000003929-D1 I
ENSMMUP00000026353 Macaca fascicularis ENSMMUP00000026353 I
Gfo_R005030 Geospiza fortis Gfo_R005030 I
Myotis_brandtii_SP1_10022992 Myotis brandtii Myotis_brandtii_SP1_10022992 I
Ogr16979 Ophisaurus gracilis Ogr16979 I
Pvit_07435 Pogona vitticeps Pvit_07435 I
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I
CLEC006997 Cimex lectularius CLEC006997 I
LCUP000151 Lucilia cuprina LCUP000151 I
LDEC008345 Leptinotarsa decemlineata LDEC008345 I
AALB008691 Anopheles albimanus AALB008691 I
AARA006360 Anopheles arabiensis AARA006360 I
AATE004178 Anopheles atroparvus AATE004178 I
ACHR002282 Anopheles christyi ACHR002282 I
ACUA022057 Anopheles culicifacies ACUA022057 I
AFAF018385 Anopheles farauti AFAF018385 I
AFUN009419 Anopheles funestus AFUN009419 I
AMAM018005 Anopheles maculatus AMAM018005 I
AMEM016115 Anopheles merus AMEM016115 I
AQUA008497 Anopheles quadriannulatus AQUA008497 I
ASIS011603 Anopheles sinensis ASIS011603 I
ASTEI04919 Anopheles stephensi ASTEI04919 I
BGLB011938 Biomphalaria glabrata BGLB011938 I
LLOJ008095 Lutzomyia longipalpis LLOJ008095 I
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I
ANCDUO_10264 Ancylostoma duodenale ANCDUO_10264 I
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I
ASU_13052 Ascaris suum ASU_13052 I
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I
BTMF_0000199301 Brugia timori BTMF_0000199301 I
BXY_0564300 Bursaphelenchus xylophilus BXY_0564300 I
D917_06327 Trichinella nativa D917_06327 I
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I
DME_0000423301 Dracunculus medinensis DME_0000423301 I
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I
GPLIN_000570600 Globodera pallida GPLIN_000570600 I
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I
HCOI00688600 Haemonchus contortus HCOI00688600 I
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I
L596_g19604 Steinernema carpocapsae L596_g19604 I
L889_g32073 Steinernema feltiae L889_g32073 I
L892_g17070 Steinernema scapterisci L892_g17070 I
L893_g2044 Steinernema glaseri L893_g2044 I
L898_g7955 Steinernema monticolum L898_g7955 I
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I
NECAME_13378 Necator americanus NECAME_13378 I
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I
nOo.2.0.1.g04030 Onchocerca ochengi nOo.2.0.1.g04030 I
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I
RSKR_0000732300 Rhabditophanes kr3021 RSKR_0000732300 I
RSKR_0000732400 Rhabditophanes kr3021 RSKR_0000732400 I
SBAD_0000755901 Soboliphyme baturini SBAD_0000755901 I
SMUV_0000007001 Syphacia muris SMUV_0000007001 I