SMUV_0000007001 (Syphacia muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMUV_0000007001 T156409_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.804 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000007001-mRNA-1 C2H2 ZF 342 364
SMUV_0000007001-mRNA-1 C2H2 ZF 370 394
SMUV_0000007001-mRNA-1 C2H2 ZF 400 422

Links

Other C2H2 ZF family TFs
Other Syphacia muris TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I 0.827
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I 0.816
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I 0.808
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I 0.808
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I 0.808
ASU_13052 Ascaris suum ASU_13052 I 0.808
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I 0.806
LOAG_01580 Loa loa LOAG_01580 I 0.804
WBGene00237583 Onchocerca volvulus WBGene00237583 I 0.804
sptf-3 Caenorhabditis elegans WBGene00012735 D 0.804
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I 0.804
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I 0.804
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I 0.804
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I 0.804
BTMF_0000199301 Brugia timori BTMF_0000199301 I 0.804
Bm6499 Brugia malayi Bm6499 I 0.804
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I 0.804
CRE28577 Caenorhabditis remanei CRE28577 I 0.804
CBG20386 Caenorhabditis briggsae CBG20386 I 0.804
NBR_0001206901 Nippostrongylus brasiliensis NBR_0001206901 I 0.803
HCOI00688600 Haemonchus contortus HCOI00688600 I 0.800
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I 0.800
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I 0.800
NECAME_13378 Necator americanus NECAME_13378 I 0.800
ANCDUO_10264 Ancylostoma duodenale ANCDUO_10264 I 0.800
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I 0.800
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I 0.800
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I 0.800
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I 0.799
DME_0000423301 Dracunculus medinensis DME_0000423301 I 0.788
L898_g7955 Steinernema monticolum L898_g7955 I 0.787
L596_g19604 Steinernema carpocapsae L596_g19604 I 0.787
L892_g17070 Steinernema scapterisci L892_g17070 I 0.787
L893_g2044 Steinernema glaseri L893_g2044 I 0.787
L889_g32073 Steinernema feltiae L889_g32073 I 0.787
GPLIN_000570600 Globodera pallida GPLIN_000570600 I 0.780
nOo.2.0.1.g04030 Onchocerca ochengi nOo.2.0.1.g04030 I 0.774
WBGene00237584 Onchocerca volvulus WBGene00237584 I 0.774
SBAD_0000755901 Soboliphyme baturini SBAD_0000755901 I 0.773
SMAR004952 Strigamia maritima SMAR004952 I 0.773
BXY_0564300 Bursaphelenchus xylophilus BXY_0564300 I 0.771
BGLB011938 Biomphalaria glabrata BGLB011938 I 0.770
RSKR_0000732300 Rhabditophanes kr3021 RSKR_0000732300 I 0.770
e_gw.339.61.1 Branchiostoma floridae e_gw.339.61.1 I 0.766
estExt_fgenesh2_pg.C_1820063 Branchiostoma floridae estExt_fgenesh2_pg.C_1820063 I 0.766
CGI_10013026 Crassostrea gigas CGI_10013026 I 0.763
Cflo_10237--XP_624316.2_APIME Camponotus floridanus Cflo_10237--XP_624316.2_APIME I 0.763
ACYPI008586 Acyrthosiphon pisum ACYPI008586 I 0.761
LLOJ008095 Lutzomyia longipalpis LLOJ008095 I 0.761
ASTEI04919 Anopheles stephensi ASTEI04919 I 0.760
ACHR002282 Anopheles christyi ACHR002282 I 0.760
SPU_009831 Strongylocentrotus purpuratus SPU_009831 I 0.760
SPU_009832 Strongylocentrotus purpuratus SPU_009832 I 0.760
AFAF018385 Anopheles farauti AFAF018385 I 0.760
CLEC006997 Cimex lectularius CLEC006997 I 0.760
ENSPMAG00000008063 Petromyzon marinus ENSPMAG00000008063 I 0.758
CPIJ003609 Culex quinquefasciatus CPIJ003609 I 0.757
AAEL003875 Aedes aegypti AAEL003875 I 0.757
ADAC004751 Anopheles darlingi ADAC004751 I 0.757
AGAP004438 Anopheles gambiae AGAP004438 I 0.757
CapteG112714 Capitella teleta CapteG112714 I 0.757
LCUP000151 Lucilia cuprina LCUP000151 I 0.757
AALB008691 Anopheles albimanus AALB008691 I 0.757
AMEM016115 Anopheles merus AMEM016115 I 0.757
AQUA008497 Anopheles quadriannulatus AQUA008497 I 0.757
ASIS011603 Anopheles sinensis ASIS011603 I 0.757
AMAM018005 Anopheles maculatus AMAM018005 I 0.757
AFUN009419 Anopheles funestus AFUN009419 I 0.757
AARA006360 Anopheles arabiensis AARA006360 I 0.757
CpipJ_CPIJ003609 Culex pipiens CpipJ_CPIJ003609 I 0.757
AATE004178 Anopheles atroparvus AATE004178 I 0.757
ACUA022057 Anopheles culicifacies ACUA022057 I 0.757
AAEL018031 Aedes aegypti AAEL018031 I 0.756