Lus10005558.g (Linum usitatissimum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Lus10005558.g T028371_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10005558 BED ZF 17 65

Links

Other BED ZF family TFs
Other Linum usitatissimum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPRI1 Arabidopsis thaliana AT2G20570 D
Lus10018649.g Linum usitatissimum Lus10018649.g I
mgf012846m Mimulus guttatus mgf012846m I
Lus10005340.g Linum usitatissimum Lus10005340.g I
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I
Carubv10026528m.g Capsella rubella Carubv10026528m.g I
Carubv10014114m.g Capsella rubella Carubv10014114m.g I
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I
PDK_20s1662851g001 Phoenix dactylifera PDK_20s1662851g001 I
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I
chr3.CM0160.680.nd Lotus japonicus chr3.CM0160.680.nd I
PK27491.1 Cannabis sativa PK27491.1 I
PK19826.1 Cannabis sativa PK19826.1 I
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I
Lus10033642.g Linum usitatissimum Lus10033642.g I
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I
MDP0000526864 Malus domestica MDP0000526864 I
MDP0000225179 Malus domestica MDP0000225179 I
Lus10041020.g Linum usitatissimum Lus10041020.g I
Lus10039883.g Linum usitatissimum Lus10039883.g I
GLYMA13G37010 Glycine max GLYMA13G37010 I
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I
PGSC0003DMG400021857 Solanum tuberosum PGSC0003DMG400021857 I
PGSC0003DMG400009378 Solanum tuberosum PGSC0003DMG400009378 I
MTR_4g078810 Medicago truncatula MTR_4g078810 I
MTR_2g090675 Medicago truncatula MTR_2g090675 I
Solyc07g053630.2 Solanum lycopersicum Solyc07g053630.2 I
GLYMA12G33430 Glycine max GLYMA12G33430 I
GLYMA12G13430 Glycine max GLYMA12G13430 I
GLYMA06G44330 Glycine max GLYMA06G44330 I
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I
Bra036015 Brassica rapa Bra036015 I
Bra033726 Brassica rapa Bra033726 I
GLK2 Arabidopsis thaliana AT5G44190 I
Pm014733 Prunus mume Pm014733 I
mgf004257m Mimulus guttatus mgf004257m I
Cucsa.321580 Cucumis sativus Cucsa.321580 I
Cucsa.087530 Cucumis sativus Cucsa.087530 I
cassava9823.m1 Manihot esculenta cassava9823.m1 I
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I
29983.m003131 Ricinus communis 29983.m003131 I
29848.m004559 Ricinus communis 29848.m004559 I
mgf007181m Mimulus guttatus mgf007181m I
Pm014123 Prunus mume Pm014123 I
Cla008926 Citrullus lanatus Cla008926 I
Cla003791 Citrullus lanatus Cla003791 I
Ca_11268 Cicer arietinum Ca_11268 I
Ca_09080 Cicer arietinum Ca_09080 I
Ca_02452 Cicer arietinum Ca_02452 I
GPRI1 Vitis vinifera VIT_12s0028g03100 I
TCM_008193 Theobroma cacao TCM_008193 I