Pavir.J15543 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J15543 T028579_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J15543.1.p BED ZF 26 88

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene04769-v1.0-hybrid Fragaria vesca gene04769-v1.0-hybrid N
Thhalv10002303m.g Eutrema salsugineum Thhalv10002303m.g N
Pavir.J25423 Panicum virgatum Pavir.J25423 N
Pavir.J10621 Panicum virgatum Pavir.J10621 N 0.738
Pavir.J08193 Panicum virgatum Pavir.J08193 N 0.786
Pavir.Ib02562 Panicum virgatum Pavir.Ib02562 N 0.762
Pavir.Hb01581 Panicum virgatum Pavir.Hb01581 N 0.738
Pavir.Hb01043 Panicum virgatum Pavir.Hb01043 N 0.786
Pavir.Cb01025 Panicum virgatum Pavir.Cb01025 N
Pavir.Ba00900 Panicum virgatum Pavir.Ba00900 N 0.786
Pavir.Ab01384 Panicum virgatum Pavir.Ab01384 N 0.976
MDP0000750292 Malus domestica MDP0000750292 N
MDP0000207354 Malus domestica MDP0000207354 N
GRMZM2G362557 Zea mays GRMZM2G362557 N 0.810
Sb10g011520 Sorghum bicolor Sb10g011520 N 0.833
Sb08g005616 Sorghum bicolor Sb08g005616 N 0.718
Sb07g014876 Sorghum bicolor Sb07g014876 N 0.810
Sb05g007535 Sorghum bicolor Sb05g007535 N 0.833
Sb05g004780 Sorghum bicolor Sb05g004780 N 0.857
Sb04g017410 Sorghum bicolor Sb04g017410 N 0.786
Sb02g013136 Sorghum bicolor Sb02g013136 N 0.786
Sb02g011140 Sorghum bicolor Sb02g011140 N 0.833
Sb01g047190 Sorghum bicolor Sb01g047190 N 0.833
Sb01g027440 Sorghum bicolor Sb01g027440 N 0.810
Sb01g024553 Sorghum bicolor Sb01g024553 N 0.833
Sb01g013490 Sorghum bicolor Sb01g013490 N 0.718
GRMZM2G454472 Zea mays GRMZM2G454472 N 0.762