CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bra034421 *(Brassica rapa)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	Bra034421	T031545_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BHLH80 M06722_2.00	Arabidopsis thaliana	DNCMACTTGCH	DGCAAGTKGNH	Dap-seq OMalley et al.(2016) bHLH80_col_a	0.879	0.922
BHLH80 M06723_2.00	Arabidopsis thaliana	DKCMACTTGCA	TGCAAGTKGMH	Dap-seq OMalley et al.(2016) bHLH80_colamp_a	0.879	0.922
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bra034421.1-P	bHLH	172	222	ATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLDEALQYVKALE

Links
Other bHLH family TFs
Other *Brassica rapa* TFs