NEUROD6 (Cavia porcellus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCPOG00000006406 T033408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.894 0.942
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.894 0.942
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.894 0.942
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.894 0.942
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.894 0.942
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.894 0.942
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.894 0.942
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.894 0.942
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.859 0.942
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.859 0.942
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.859 0.942
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.859 0.942
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.859 0.942
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000005773 bHLH 75 127

Links

Other bHLH family TFs
Other Cavia porcellus TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
srfA Dictyostelium discoideum DDB_G0281387 D
SRF Homo sapiens ENSG00000112658 D
Srf Mus musculus ENSMUSG00000015605 D
CAOG_01457 Capsaspora owczarzaki CAOG_01457 I
SNOG_07763 Stagonospora nodorum SNOG_07763 I
ADAC008363 Anopheles darlingi ADAC008363 I
ARB_02013 Arthroderma benhamiae ARB_02013 I
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I
CapteG221100 Capitella teleta CapteG221100 I
CGI_10019446 Crassostrea gigas CGI_10019446 I
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I
DI09_81p70 Microsporidia sp DI09_81p70 I
EFV60876 Trichinella spiralis EFV60876 I
SRF Anolis carolinensis ENSACAG00000004798 I
ENSAMEG00000012452 Ailuropoda melanoleuca ENSAMEG00000012452 I
ENSAMXG00000001100 Astyanax mexicanus ENSAMXG00000001100 I
ENSAMXG00000003129 Astyanax mexicanus ENSAMXG00000003129 I
SRF Bos taurus ENSBTAG00000012777 I
SRF Canis familiaris ENSCAFG00000001829 I
srf Ciona intestinalis ENSCING00000018042 I
SRF Callithrix jacchus ENSCJAG00000005223 I
ENSCSAG00000011622 Chlorocebus sabaeus ENSCSAG00000011622 I
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I
srfa Danio rerio ENSDARG00000053918 I
srfb Danio rerio ENSDARG00000102867 I
SRF Dasypus novemcinctus ENSDNOG00000014133 I
SRF Equus caballus ENSECAG00000009068 I
SRF Felis catus ENSFCAG00000025180 I
SRF Gasterosteus aculeatus ENSGACG00000003778 I
srfa Gasterosteus aculeatus ENSGACG00000020002 I
SRF Gorilla gorilla ENSGGOG00000006293 I
ENSGMOG00000001540 Gadus morhua ENSGMOG00000001540 I
ENSGMOG00000008883 Gadus morhua ENSGMOG00000008883 I
ENSLACG00000014404 Latimeria chalumnae ENSLACG00000014404 I
ENSLOCG00000015887 Lepisosteus oculatus ENSLOCG00000015887 I
ENSMICG00000008327 Microcebus murinus ENSMICG00000008327 I
SRF Macaca mulatta ENSMMUG00000000033 I
SRF Monodelphis domestica ENSMODG00000018981 I
ENSMPUG00000013090 Mustela putorius furo ENSMPUG00000013090 I
ENSNLEG00000004203 Nomascus leucogenys ENSNLEG00000004203 I
SRF Oryctolagus cuniculus ENSOCUG00000002892 I
SRF Otolemur garnettii ENSOGAG00000029623 I
ENSONIG00000010161 Oreochromis niloticus ENSONIG00000010161 I
ENSONIG00000010505 Oreochromis niloticus ENSONIG00000010505 I
ENSOPRG00000002509 Ochotona princeps ENSOPRG00000002509 I
SRF Oryzias latipes ENSORLG00000013036 I
ENSPANG00000006410 Papio anubis ENSPANG00000006410 I
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I
ENSPFOG00000022718 Poecilia formosa ENSPFOG00000022718 I
ENSPPYG00000016633 Pongo abelii ENSPPYG00000016633 I
SRF Pan troglodytes ENSPTRG00000018189 I
SRF Pteropus vampyrus ENSPVAG00000008728 I
Srf Rattus norvegicus ENSRNOG00000018232 I
SRF Sus scrofa ENSSSCG00000001661 I
ENSSTOG00000014222 Ictidomys tridecemlineatus ENSSTOG00000014222 I
srfa Tetraodon nigroviridis ENSTNIG00000002923 I
SRF Tetraodon nigroviridis ENSTNIG00000013420 I
srfa Takifugu rubripes ENSTRUG00000011448 I
SRF Takifugu rubripes ENSTRUG00000017531 I
SRF Tursiops truncatus ENSTTRG00000007017 I
SRF Vicugna pacos ENSVPAG00000008912 I
ENSXMAG00000006964 Xiphophorus maculatus ENSXMAG00000006964 I
HelroG137972 Helobdella robusta HelroG137972 I
ISCW019966 Ixodes scapularis ISCW019966 I
LotgiG59850 Lottia gigantea LotgiG59850 I
MESCA001358 Megaselia scalaris MESCA001358 I
ML154140a Mnemiopsis leidyi ML154140a I
NBO_404g0004 Nosema bombycis NBO_404g0004 I
NBO_73g0004 Nosema bombycis NBO_73g0004 I
NBO_81g0015 Nosema bombycis NBO_81g0015 I
NEMVEDRAFT_v1g164599 Nematostella vectensis NEMVEDRAFT_v1g164599 I
SINV23954 Solenopsis invicta SINV23954 I
SMAR003014 Strigamia maritima SMAR003014 I
Smp_097730 Schistosoma mansoni Smp_097730 I
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I
tetur02g05030 Tetranychus urticae tetur02g05030 I
TRV_05844 Trichophyton verrucosum TRV_05844 I
Brh_R011000 Buceros rhinoceros Brh_R011000 I
ENSBTAP00000016981-D1 Bos grunniens ENSBTAP00000016981-D1 I
ENSP00000265354 Macaca fascicularis ENSP00000265354 I
Myotis_brandtii_SRF_10026135 Myotis brandtii Myotis_brandtii_SRF_10026135 I
Pvit_03053 Pogona vitticeps Pvit_03053 I
estExt_fgeneshDP_kg.C_1450001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1450001 I
estExt_fgeneshNG_pg.C_520029 Naegleria gruberi estExt_fgeneshNG_pg.C_520029 I
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I
Ocbimv22020285m.g Octopus bimaculoides Ocbimv22020285m.g I
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I
EFA85834.1 Polysphondylium pallidum EFA85834.1 I
Sjc_0026780 Schistosoma japonicum Sjc_0026780 I
srf Xenopus tropicalis XB-GENE-482036 I
srf.L Xenopus laevis XB-GENE-864819 I
XP_002156545.1 Hydra magnipapillata XP_002156545.1 I
XP_002164692.1 Hydra magnipapillata XP_002164692.1 I
ACHR000964 Anopheles christyi ACHR000964 I
ADIR000346 Anopheles dirus ADIR000346 I
AFUN006147 Anopheles funestus AFUN006147 I
ASIS007770 Anopheles sinensis ASIS007770 I
ASTEI07120 Anopheles stephensi ASTEI07120 I
BGLB003854 Biomphalaria glabrata BGLB003854 I
A_01192 Schistosoma haematobium A_01192 I
D917_02561 Trichinella nativa D917_02561 I
D918_07967 Trichuris suis D918_07967 I
ECANG7_07506 Echinococcus canadensis ECANG7_07506 I
ECPE_0001369301 Echinostoma caproni ECPE_0001369301 I
EmuJ_000377500 Echinococcus multilocularis EmuJ_000377500 I
HDID_0000576901 Hymenolepis diminuta HDID_0000576901 I
HmN_000858800 Hymenolepis microstoma HmN_000858800 I
HNAJ_0000775201 Hymenolepis nana HNAJ_0000775201 I
MCOS_0000609801 Mesocestoides corti MCOS_0000609801 I
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I
SCUD_0000460501 Schistosoma curassoni SCUD_0000460501 I
SMRZ_0002507801 Schistosoma margrebowiei SMRZ_0002507801 I
SROB_0002013401 Schistosoma rodhaini SROB_0002013401 I
TASK_0000457101 Taenia asiatica TASK_0000457101 I
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I
TsM_000925700 Taenia solium TsM_000925700 I
TTAC_0000870401 Hydatigera taeniaeformis TTAC_0000870401 I
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I
SMU15039528 Schmidtea mediterranea SMU15039528 N
csin112160 Clonorchis sinensis csin112160 N
SPER_0002407601 Spirometra erinaceieuropaei SPER_0002407601 N
SPER_0003232401 Spirometra erinaceieuropaei SPER_0003232401 N
SSLN_0001407901 Schistocephalus solidus SSLN_0001407901 N
T265_07052 Opisthorchis viverrini T265_07052 N